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PICS
GO
PICS
GO
PICS
updated 12.5 years ago by
Arnaud Droit
▴ 20 • written 12.5 years ago by
Julie Zhu
★ 4.3k
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PICS: vignette code outdated (use of GenomeData-object)
convert
PICS
convert
PICS
updated 12.9 years ago by
Valerie Obenchain
★ 6.8k • written 13.0 years ago by
Samuel Wuest
▴ 330
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1.2k
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help needed in namespace definition
GenomicRanges
PICS
GenomicRanges
PICS
updated 12.7 years ago by
Hervé Pagès
16k • written 12.7 years ago by
Frederic Fournier
▴ 10
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970
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Regarding MotIv and PICS package install
PICS
PICS
updated 12.0 years ago by
Dan Tenenbaum
★ 8.2k • written 12.0 years ago by
Swaroopa Muppiri
▴ 20
0
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0
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908
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Hey sexy still here?
PICS
PICS
15.9 years ago
Karly Faith
▴ 10
0
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0
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846
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PICS mm9 mappability map?
Cancer
PICS
Cancer
PICS
13.6 years ago
Hamid Bolouri
▴ 90
0
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0
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898
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W: unnormalised vs normalised distribution
Cancer
gcrma
PICS
Cancer
gcrma
PICS
17.8 years ago
Benjamin Otto
▴ 830
7 results • Page
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Comment: FilterByExpr low counts with small sample size
by
Gordon Smyth
50k
As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…
Comment: Batch correction and repeated measures
by
Gordon Smyth
50k
In your code, it was clear that `expr.mat` was a matrix rather than a DGEList, so it has to be a count matrix. If you have a DGEList object…
Comment: Methylation Analysis experiment design using Limma
by
Gordon Smyth
50k
I don't analyse methylation arrays so cannot advise on specific limma settings for that type of data. Please follow the advice of the methy…
Comment: Light difference when using coef vs omit a group when compare 3 groups.
by
Chris
• 0
Hi Gordon, thank you so much for further guidance! I discussed this issue with psychology doctor who treat Alzheimer patients and they don'…
Comment: Single-Cell Data Simulation from Bulk RNA-seq
by
wichaidi
• 0
Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.
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Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
DESeq2 variance transformation error and plot dispersion Estimate
A: DESeq2 variance transformation error and plot dispersion Estimate
ensembl to hgnc symbols creates duplicates
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