Biostar Promoter

Showing : promoter • reset

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1.9k

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promoter granges refseq ucsc organismdb

updated 7.3 years ago by Robert Castelo ★ 3.0k • written 7.3 years ago by efoss ▴ 10

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1.4k

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bsgenome txdb promoter

updated 7.1 years ago by Martin Morgan 25k • written 7.1 years ago by sekawaiwai2006 ▴ 20

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1.3k

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TxDB genomicfeatures promoter getpromoterseq

updated 5.0 years ago by Hervé Pagès 16k • written 5.0 years ago by rbenel ▴ 20

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1.3k

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repitools promoter tss annotation

5.0 years ago Ryan C. Thompson 7.8k

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1.1k

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VariantAnnotation promoter drosophila melanogaster

updated 8.2 years ago by Valerie Obenchain ★ 6.7k • written 8.2 years ago by lidia.mateo ▴ 30

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1.0k

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genomicranges genomicfeatures promoter upstream_flank

4.5 years ago Wojeff • 0

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840

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dexseq promoter utr

updated 6.8 years ago by Alejandro Reyes ★ 1.8k • written 6.8 years ago by joan.hooper • 0

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787

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r granges promoter

updated 4.0 years ago by Hervé Pagès 16k • written 4.0 years ago by eggrandio • 0

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676

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promoter

updated 2.8 years ago by Hervé Pagès 16k • written 2.8 years ago by Charles Plessy ▴ 170

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576

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promoter GenomicRanges rtracklayer GRanges

18 months ago Arslan • 0

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567

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TSS promoter cage cager

4.3 years ago bharata1803 ▴ 40

11 results • Page 1 of 1

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Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g. by tahir.msajid • 0

Hi Rory, I came up with another question while analyzing my data. A scenario of analysis: Path to bam files, path to peaks files (broad pe…

Comment: How to deal with the negative values from EBPlusPlusAdjustPANCAN_IlluminaHiSeq_R by Yang Shi ▴ 10

Thanks for your reply sir! Here is the data ([EBPlusPlusAdjustPANCAN_IlluminaHiSeq_RNASeqV2.geneExp.tsv][1]). And there is the data process…

Comment: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va by davidhillis • 0

Thank you!

Comment: Time-course, comparison of two groups by boczniak767 ▴ 720

Thank you Gordon for your time and patience, I'd try to be more specific. I've read carefully the three first chapters of `edgeR` user guid…

Comment: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va by James W. MacDonald 62k

This works for me. ``` > library(VariantAnnotation) > library(TxDb.Hsapiens.UCSC.hg19.knownGene) > txdb <- TxDb.Hsapiens.UCSC.hg19.knownGe…

Votes

Comment: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va

A: Pathway analysis of differentially methylated CpGs

Comment: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va

Answer: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va

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