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Handling pseudogenes in RNA-seq
rna-seq pseudogenes STAR counts
updated 4.6 years ago by 1.1k • written 4.7 years ago by • 0
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Comment: Genomics data by James W. MacDonald 62k
This post does not fit the theme of this forum.
Comment: Adding gene names to DESeq result by artem.vorobyev • 0
Hi, if it doesn't have to be GenomicFeature package, then there are plenty of other options. I'm usually using biomaRt R package. ``` res<…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 39k
We have a part of the bootRanges vignette where we assess the distance between subsequent ranges. Importantly, this is done per iteration, …
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0
Hello Dr. Michael, I did the analysis with withinChrom=FALSE How do you calculate inter range or inter feature distance? how do you take…
Comment: Why in Bioconductor community people rarely upvote questions? by L ▴ 40
These are very good points, Gordon. It was NOT my intention to go personal, but I appreciate your comment entirely! And indeed, talking abo…
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A: Subclustering after MNN batch-correction
A: Subclustering after MNN batch-correction
Answer: Why in Bioconductor community people rarely upvote questions?
Answer: Which input file is used for DGEList in EgdeR?
Answer: Identifying DEGs using lfcshrink()
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