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Comment: Filtering low intensity probes in microarray data
I have the same issues. I want to post a write to ask everyone. So, I find your post. I can get the best answer. [geometry dash scratch]…
Comment: Can DESeq2 handle huge variations in sequencing depth among samples?
Thanks for your suggestion, Michael. I will try that strategy.
Comment: Error with IsoformSwitchAnalyzer: analyzePFAM
It seems that the problem doesn't occur when the input file is significantly shortened to ~20 transcripts! Please help
Comment: Recount3 data correspond to TCGA data
I want to add to this question, the recount3 repository uses other sampleIDs then TCGA. I know that before the IDs could be converted by us…
Comment: BAM files to Genomic Ranges object
First of all I want to thank Herve Pages and Martin Morgan for their kind >> answers. And I want to apologize for this delay answering back…
A: ggbio error: Objects of type OrganismDb not supported by autoplot
Answer: DeSEQ 2 Error: some values in assay are negative
DESeq2 Error from Installing a Package
Answer: Using PEER to identify hidden confounders in RNA-seq data (not working)
Comment: Error: biomaRt has encountered an unexpected server error.
Tiago C. Silva
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