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r3.2.2
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"Error in readRDS(file) : unknown input format" appearing every time starting Rstudio after BiocUpgrade
BiocUpgrade
Rstudio
Bioconductor
R3.2.2
8.4 years ago
svlachavas
▴ 830
0
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907
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Custom cdf files and genes
cdf
microarray
r3.2.2
updated 7.3 years ago by
James W. MacDonald
65k • written 7.3 years ago by
12021560-002
• 0
2 results • Page
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Comment: Trying to use enrichGO
by
fernanda.backsouza
• 0
Thank you for yout time guido, 1) When the pvalueCutoff = 1 nothing change. 2) output from str(ortologos_filtrados) data.frame': 14 obs. …
Comment: Trying to use enrichGO
by
Guido Hooiveld
★ 3.9k
Please provide more information! In your first post you seem to report another error than in your 2nd post: `No gene can be mapped...` vers…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Michael Love
41k
I don't really have any additional suggestion here.
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Seyram M.
• 0
Dear Michael, I tried all three ways (the orIginal, increasing the number of required samples,and subsetting (the countdata and metadata be…
Comment: DESeq2 - dispersion estimation when there is none
by
Michael Love
41k
The red line does assume that shape but the fact the black points show that pattern is discussed in the 2014 paper. > Some caution is warr…
Votes
DESeq2: How to find out how well the model fits the data?
Comment: DESeq2 - dispersion estimation when there is none
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
Answer: OrgDb for maize
Answer: DESeq2 - dispersion estimation when there is none
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