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Comment: Setting up a multi-factor experiement
by
john.briseno
•
0
thanks, will do! we work with a non-model organism, but perhaps the folks who do our genomics/sequencing have some input.
Comment: Mixed up sample info with plotPCA
by
Michael Love
40k
Just as a note, if the sample info table had been named (that is `rownames(sampleInfo)` not `NULL`, DESeq2 would have been able to detect t…
Comment: Mixed up sample info with plotPCA
by
sara.jacobson
•
0
You were correct. The order of my samples in my sample info-file did not match the order of the samples in my count data file. Thank you!
Answer: Delete all profiles
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shepherl
3.5k
Please send requests to webmaster@bioconductor.org providing more details like the full emails associated with the accounts. Thank you
Comment: Mixed up sample info with plotPCA
by
Michael Love
40k
Check colnames of count data.
I think you are providing these in different order to DESeq2.
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