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rbiopaxparser
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bug in nem's transitive.reduction? (and thus rBiopaxParser)
nem
graphs
rbiopaxparser
7.2 years ago
Ramon Diaz-Uriarte
▴ 70
0
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1
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1.1k
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Rbiopaxparser: how to extract a subnetwork from a pathway
Rbiopaxparser
updated 9.5 years ago by
Vincent J. Carey, Jr.
6.7k • written 9.5 years ago by
Guido Leoni
▴ 200
0
votes
2
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1.2k
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rBiopaxParser error
rBiopaxParser
rBiopaxParser
updated 10.9 years ago by
Dan Tenenbaum
★ 8.2k • written 10.9 years ago by
suzy.stiegelmeyer@syngenta.com
▴ 40
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4
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1.3k
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rBiopaxParser, Reactome and namespaces
rBiopaxParser
rBiopaxParser
updated 10.9 years ago by
Frank Kramer
▴ 60 • written 10.9 years ago by
Paul Shannon
▴ 470
0
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0
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1.1k
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BioPAX parsing
Pathways
Network
Rgraphviz
rBiopaxParser
Pathways
Network
Rgraphviz
rBiopaxParser
11.6 years ago
Frank Kramer
▴ 10
5 results • Page
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Answer: minfi::read.metharray.exp
by
Basti
▴ 770
Could you show `list.files("~/Users/clarachretienneau/Desktop/clock epigenetic/PJ1209132_ScanData")` ? There may be a problem related to th…
Comment: DESeq2 - dispersion estimation when there is none
by
WardDeb
• 0
Thank you for the pointers, I'll revert back again to the method section of the paper. As for the negative relationship of the estimated di…
Comment: Error for AnnotationForge makeOrgPackageFromNCBI function
by
Gayatri
• 0
Hello James, How to generate the db? By running the makeOrgPackageFromNCBI() command? I have tried doing that, first by just deleting the …
Answer: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param
by
Tim Peters
▴ 170
Hi Jose and Russ, Apologies to Jose for not seeing this earlier. Sometimes the loess smoother in the bottom panel will throw this error …
Comment: Trying to use enrichGO
by
fernanda.backsouza
• 0
Sure, I changed it but still NULL G0 <- enrichGO( gene = ortologos_filtrados$Gene.ID, OrgDb = org.Cs.eg.db, keyType = "ENTREZID",…
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Answer: DESeq2 - dispersion estimation when there is none
Comment: Cannabis and KEGGgraph
Comment: Cannabis and KEGGgraph
Answer: Cannabis and KEGGgraph
Answer: Differentially expressed genes in monocle pseudotime
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