Showing : rcpp • reset
7
votes
11
replies
16k
views
Error: package or namespace load failed for...
package installation flowviz flowcore rcpp flow cytometry
updated 6.9 years ago by 25k • written 6.9 years ago by ▴ 50
4
votes
17
replies
3.2k
views
How to construct a valid GRanges object from RCPP and pass back to R
GRanges IRanges RCPP Constructor
updated 6.5 years ago by ▴ 10 • written 6.6 years ago by ▴ 80
4
votes
6
replies
2.4k
views
mzR (2.8.1) Rcpp (0.12.10) compiler linker issue in Bioconductor 3.4, R 3.3.3
software error mzR Rcpp readMSData2 bioconductor
updated 7.0 years ago by 65k • written 7.0 years ago by • 0
3
votes
1
reply
944
views
mzR and Rcpp issue
Issue Rcpp mzR
updated 3.4 years ago by 1.6k • written 3.4 years ago by • 0
3
votes
6
replies
1.5k
views
Accessing GRangesList rows in Rcpp
Rcpp GRangesList
updated 6.5 years ago by 25k • written 6.5 years ago by ▴ 80
1
vote
4
replies
1.5k
views
unimod through pwiz library?
mzR Rcpp
updated 8.4 years ago by 1.6k • written 8.4 years ago by • 0
0
votes
3
replies
1.4k
views
mzR library issue
mzr rcpp
updated 6.7 years ago by 1.6k • written 6.7 years ago by • 0
0
votes
1
reply
1.0k
views
Rcpp adding circular ranges to GRanges object in c++
GRanges circular rcpp IRanges
6.4 years ago hauken_heyken ▴ 80
0
votes
3
replies
1.7k
views
BiocParallel NULL value passed as symbol address
BiocParallel Rcpp
updated 6.1 years ago by 25k • written 6.1 years ago by ▴ 30
0
votes
1
reply
3.0k
views
Error : Expecting a single value: [extent=3]
bioconductor rcpp r
5.8 years ago charlesgwellem ▴ 10
0
votes
1
reply
830
views
Resources to learn about s4 object extension/inheritance, custom print methods, and new operations
S4 Rcpp InteractionSet IRanges Rle
updated 3.9 years ago by ★ 28k • written 3.9 years ago by • 0
0
votes
0
replies
499
views
Rcpp std::chdir
Rcpp
23 months ago ullrich ▴ 20
0
votes
1
reply
727
views
Using DNAStrings with Rcpp without converting to Character
Biostrings DNAString Rcpp
updated 20 months ago by 16k • written 2.0 years ago by • 0
0
votes
1
reply
826
views
mzR has been built against a different Rcpp version (1.0.10) than is installed on your system (1.0.11).
erah mzR Rcpp
updated 7 months ago by 65k • written 7 months ago by • 0
0
votes
2
replies
1.9k
views
Problem in MEtShot install_ mzR /Rcpp version
mzR Rcpp
8.6 years ago gip • 0
0
votes
1
reply
195
views
Rcpp compilation error
Release Rcpp
updated 6 weeks ago by ★ 4.0k • written 6 weeks ago by ▴ 40
0
votes
4
replies
2.8k
views
mzR could not be loaded on XCMS
xcms msdata mzR Rcpp metabolomics
8.3 years ago Titan • 0
0
votes
4
replies
1.9k
views
Compiler/linker problem of mzR (and Rcpp)
mzr rcpp mzr rcpp compilation error
updated 8.1 years ago by 1.6k • written 8.1 years ago by • 0
0
votes
0
replies
1.7k
views
Cannot install package "mzR"
mzR Rcpp
8.1 years ago cheng68 • 0
0
votes
4
replies
2.8k
views
Unable to install Rcpp package for genefo
Rcpp genefo linux linux mint Rstudio
updated 7.7 years ago by • 0 • written 7.7 years ago by • 0
0
votes
2
replies
1.2k
views
Problem with mzR and/or Rcpp?
mzr rcpp mzr rcpp XCMS
updated 6.8 years ago by 1.6k • written 6.8 years ago by • 0
21 results • Page 1 of 1
Recent ...
Replies
Comment: How to retrieve gene ontology GO class from gene list? by James W. MacDonald 65k
Yes. The `keys` argument to both `select` and `mapIds` will accept a vector (see `?select` for more information). Also, the [vignette][1] f…
Comment: How to retrieve gene ontology GO class from gene list? by bandconductor • 0
Thanks, this is potentially a much faster way than parsing BiomRt. However, it is only returning one GO term right now (biomaRt returns a f…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by James W. MacDonald 65k
Both `RUVseq` and `sva` are meant to be used to remove technical variability. The problem is the identification of variability that is tech…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by Alexandre • 0
Hello James, Thank you very much for your answer and taking the time to read my post. I understand your remark, but isn't the approach o…
Comment: PCA plot suggestions by JKim • 0
cross post: https://www.biostars.org/p/9593486/
Votes
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
Answer: Use of negative binomial model for exponential decay rate estimation using DESeq
C: null model and DEXSeqDataSet object in DEXSEQ
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
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