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rdgidb
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queryDGIdb lexical error for some genes
lexicalerror
rDGIdb
DGIdb
json
7 days ago
Dennis
• 0
0
votes
6
replies
425
views
rDGIdb package inconsistency with web interface
rDGIdb
4 months ago
christopherjamessteel1990
• 0
0
votes
0
replies
456
views
rDGIdb package: score of the results
rDGIdb
r
13 months ago
HELEN
• 0
0
votes
0
replies
505
views
Timeout error when querying DGIDB
rDGIdb
22 months ago
Jannah
• 0
0
votes
0
replies
442
views
DGIdb service not available
rDGIdb
2.2 years ago
DannyM
• 0
0
votes
0
replies
601
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Is there currently something wrong with the rDGIdb API?
rDGIdb
3.4 years ago
mike-zx
• 0
0
votes
1
reply
1.0k
views
What happends with a package in submission through the old issue tracker?
github
package submission
rDGIdb
issue tracker
updated 7.8 years ago by
Martin Morgan
25k • written 7.8 years ago by
Thomas Thurnherr
• 0
7 results • Page
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Comment: FilterByExpr low counts with small sample size
by
Gordon Smyth
50k
As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…
Comment: Batch correction and repeated measures
by
Gordon Smyth
50k
In your code, it was clear that `expr.mat` was a matrix rather than a DGEList, so it has to be a count matrix. If you have a DGEList object…
Comment: Methylation Analysis experiment design using Limma
by
Gordon Smyth
50k
I don't analyse methylation arrays so cannot advise on specific limma settings for that type of data. Please follow the advice of the methy…
Comment: Light difference when using coef vs omit a group when compare 3 groups.
by
Chris
• 0
Hi Gordon, thank you so much for further guidance! I discussed this issue with psychology doctor who treat Alzheimer patients and they don'…
Comment: Single-Cell Data Simulation from Bulk RNA-seq
by
wichaidi
• 0
Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.
Votes
Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
DESeq2 variance transformation error and plot dispersion Estimate
A: DESeq2 variance transformation error and plot dispersion Estimate
ensembl to hgnc symbols creates duplicates
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