Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
reactome.db
•
reset
3
votes
4
replies
2.2k
views
Download of package ‘reactome.db’ failed (Ubuntu, not for Windows)
reactome.db
ReactomePA
3.1 years ago
florianjt
• 0
5
votes
6
replies
2.3k
views
Download errors during Bioconductor 3.12 update
reactome.db
Bioconductor
BiocManager
updated 3.4 years ago by
Martin Morgan
25k • written 3.4 years ago by
Michael Steinbaugh
▴ 90
0
votes
5
replies
1.8k
views
ReactomePA / Reactome: Crash when plotting
reactomepa
reactomepa reactome bioconductor viewpathway
reactome.db
reactome
5.8 years ago
martin.busch
• 0
3
votes
4
replies
1.8k
views
Enrichment Analysis for Shot-gun proteomics data using the ReactomePA package: problem with identities loss
reactomepa
reactome.db
reactome
proteomics
uniprot accessions
updated 6.4 years ago by
willem.ligtenberg
▴ 150 • written 6.4 years ago by
Miguel.Cosenza
▴ 10
0
votes
1
reply
1.0k
views
Retrieve the reactome ID of a protein
reactome.db
updated 6.7 years ago by
alserg
▴ 240 • written 6.7 years ago by
Lluís Revilla Sancho
▴ 730
0
votes
5
replies
2.5k
views
reactome.db installation problem
reactome.db
bioclite
6.9 years ago
Jan-Jaap
• 0
6
votes
15
replies
2.8k
views
Change in pathway IDs scheme in reactome.db
reactome.db
fgsea
updated 6.9 years ago by
willem.ligtenberg
▴ 150 • written 6.9 years ago by
alserg
▴ 240
3
votes
7
replies
2.1k
views
Misleading information in reactome.db
reactome.db
7.1 years ago
Lluís Revilla Sancho
▴ 730
1
vote
1
reply
1.3k
views
Unable to see reactome.db dbschema
reactome.db
rsqlite
updated 7.1 years ago by
willem.ligtenberg
▴ 150 • written 7.1 years ago by
Lluís Revilla Sancho
▴ 730
3
votes
5
replies
1.6k
views
Selecting few ids from reactome.db
annotationdbi
reactome.db
bug
updated 7.2 years ago by
Martin Morgan
25k • written 7.2 years ago by
Lluís Revilla Sancho
▴ 730
0
votes
6
replies
1.5k
views
Is reactome.db still updated?
reactome.db
annotation
pathways
7.4 years ago
Guido Hooiveld
★ 3.9k
5
votes
6
replies
2.3k
views
Reactome pathway names from IDs?
biomart
reactome
reactome.db
id
updated 8.3 years ago by
James W. MacDonald
65k • written 8.3 years ago by
enricoferrero
▴ 660
0
votes
1
reply
1.3k
views
Reactome's bug of feature?
reactome.db
updated 8.6 years ago by
willem.ligtenberg
▴ 150 • written 8.6 years ago by
petyuk
▴ 70
8
votes
14
replies
3.7k
views
reactome.db is not updated?
genesetenrichment
pathways
reactome.db
updated 9.0 years ago by
willem.ligtenberg
▴ 150 • written 9.3 years ago by
Guangchuang Yu
★ 1.2k
14 results • Page
1 of 1
Recent ...
Replies
Comment: gds in GEOmetadb 2023-06-26 version is empty
by
ulna
• 0
[@ilayahari][1][basketball stars][2] The complete version of GEOmetadb cannot be downloaded, even though the demo file works. [1]: http…
Answer: edgeR, 3 x 2 design with a batch effect and contrasts
by
Gordon Smyth
50k
If you include `0+` in the model formula, then the order of the batch and treatment factors in the model becomes important. You need `0+gro…
Answer: Problem converting msigdb Human symbols to Zebrafish in gmt format
by
James W. MacDonald
65k
The main goal here is to map human gene symbols to something else, which you can use the `Orthology.eg.db` package to do. You could also us…
Comment: How can I compute AIC for MAST hurdle model fitted in the whole dataset?
by
rproendo
▴ 20
Hi OP, checking in to see if you found a solution to this issue. I'm also interested in using AICs to evaluate model fits in MAST.
Comment: padj-based gradient scale from barplot (clusterProfiler results) does not work p
by
Eva
▴ 10
Oh god, it is right, how I didn't realise before. I got confused with the scientific format of the numbers and I was in a loop for nothing.…
Votes
Answer: Problem converting msigdb Human symbols to Zebrafish in gmt format
Answer: Problem converting msigdb Human symbols to Zebrafish in gmt format
A: HLA genes missing from TxDb.Hsapiens.UCSC.hg38.knownGene
Answer: Problem converting msigdb Human symbols to Zebrafish in gmt format
DESeq2 design with multiple factors
Awards
• All
Popular Question
to
rproendo
▴ 20
Popular Question
to
Wolfgang RAFFELSBERGER
▴ 140
Popular Question
to
Dario Strbenac
★ 1.5k
Scholar
to
Hervé Pagès
16k
Popular Question
to
Gordon Smyth
50k
Locations
• All
Slovakia,
just now
United States,
25 minutes ago
WEHI, Melbourne, Australia,
30 minutes ago
Canada,
40 minutes ago
United States,
45 minutes ago
Traffic: 661 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6