Bioconductor Reactome.db

Showing : reactome.db • reset

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3.7k

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reactome.db ReactomePA

5.1 years ago florianjt • 0

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4.2k

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reactome.db Bioconductor BiocManager

updated 5.3 years ago by Martin Morgan 25k • written 5.4 years ago by Michael Steinbaugh ▴ 90

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reactomepa reactomepa reactome bioconductor viewpathway reactome.db reactome

7.7 years ago martin.busch • 0

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3.0k

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reactomepa reactome.db reactome proteomics uniprot accessions

updated 8.4 years ago by willem.ligtenberg ▴ 150 • written 8.4 years ago by Miguel.Cosenza ▴ 10

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1.6k

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reactome.db

updated 8.6 years ago by alserg ▴ 280 • written 8.7 years ago by Lluís Revilla Sancho ▴ 760

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reactome.db bioclite

8.8 years ago Jan-Jaap • 0

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reactome.db fgsea

updated 8.9 years ago by willem.ligtenberg ▴ 150 • written 8.9 years ago by alserg ▴ 280

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3.2k

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reactome.db

9.0 years ago Lluís Revilla Sancho ▴ 760

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reactome.db rsqlite

updated 9.1 years ago by willem.ligtenberg ▴ 150 • written 9.1 years ago by Lluís Revilla Sancho ▴ 760

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annotationdbi reactome.db bug

updated 9.2 years ago by Martin Morgan 25k • written 9.2 years ago by Lluís Revilla Sancho ▴ 760

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2.3k

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reactome.db annotation pathways

9.4 years ago Guido Hooiveld ★ 4.1k

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biomart reactome reactome.db id

updated 10.3 years ago by James W. MacDonald 68k • written 10.3 years ago by enricoferrero ▴ 680

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reactome.db

updated 10.6 years ago by willem.ligtenberg ▴ 150 • written 10.6 years ago by petyuk ▴ 70

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5.5k

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genesetenrichment pathways reactome.db

updated 10.9 years ago by willem.ligtenberg ▴ 150 • written 11.3 years ago by Guangchuang Yu ★ 1.2k

14 results • Page 1 of 1

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Comment: Inclusion of non-coding portions of transcripts (UTR-regions and introns) within by Pat • 0

Ill be honest, I didnt trust any of these services for a long time. Im a political science major and the pressure around writing is intense…

Comment: Question on processing compound protein groups in limpa by brianpeterson1210 • 0

Thank you[,][1] Appreciated! [1]: http://paint3d.org

Comment: Subsetting DDS object for individual conditions over time by A ▴ 60

Hi @atpoint Thank you for the quick reply! and this makes sense! I will confirm with a corr to see how the SFs differ but also how DE dif…

Answer: Subsetting DDS object for individual conditions over time by ATpoint ★ 5.0k

It would surprise my quite a bit if the size factors would differ notably between subset or not. I would always try to keep the size factor…

Comment: GSEA error by Adithi • 0

Thank you so much. That makes perfect sense to me. I will work on this.

Votes

Comment: Question about using LRT test for time course experiments with DESeq2

A: DESeq2 LRT test for multi-factor designs

Answer: RNA Seq using Lrt

Answer: DESeq2 LRT Reduced Formula

Answer: DESeq2: LRT or WALD guidance

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Teacher to Michael Love 43k