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read.FCS
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0
votes
8
replies
1.5k
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unable to read FCS: expecting the bitwidth to be the same for all parameters
flowcore
read.fcs
6.8 years ago • updated 6.5 years ago
michael.gaspar
• 0
0
votes
1
reply
1.1k
views
flowCore: using read.FCS with which.lines is not time efficient?
flowcore
read.FCS
flowcytometry
updated 7.4 years ago by
Jiang, Mike
★ 1.3k • written 7.5 years ago by
skiaphrene
• 0
0
votes
1
reply
983
views
read.flowSet error Error: vector::_M_range_check
software error
read.flowset()
read.fcs
flowcore
flowcytometry
6.3 years ago
e.bestion
• 0
1
vote
1
reply
780
views
read.FCS memory limit? - $PnRNAis larger than R's numeric limit
flowCore
read.FCS
memory_limit
3.4 years ago
lloyd.izard
▴ 80
0
votes
0
replies
643
views
Uploading FCS files with flow cytometry data
software error
R
read.fcs
5.9 years ago
akisheev89
• 0
2
votes
2
replies
489
views
Passing truncate_max_range=FALSE to read.ncdfFlowSet
ncdfFlow
flowCore
ncdfFlowSet
read.FCS
updated 2.1 years ago by
Jake Wagner
▴ 280 • written 2.1 years ago by
alavy
▴ 10
0
votes
1
reply
487
views
Error after assignPrelim(), CyTOF compenstation
CATALYST
flowCore
assignPrelim
Error in vapply
read.FCS
3.3 years ago
j.krop
• 0
1
vote
1
reply
378
views
Error when using read.FCS
compensation
flowCore
FlowCore
read.FCS
updated 15 months ago by
SamGG
▴ 270 • written 15 months ago by
Pepijn
• 0
0
votes
1
reply
190
views
Error in flowCore::read.FCS(): Error in uint2double(splitted, endian == "big") : vector
read.FCS
flowCore
6 months ago
Rainer
• 0
9 results • Page
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Replies
Comment: CPM after RUVseq
by
James W. MacDonald
59k
Also, you might be confused about something. CPM is counts/million counts, which *uses library size to scale normalize* and logCPM is just…
Comment: CPM after RUVseq
by
James W. MacDonald
59k
You shouldn't use CPM or logCPM for any of the steps! To use `RUVr` you need to fit a preliminary model using `edgeR`, which takes counts a…
Comment: CPM after RUVseq
by
Jess
• 0
Thank you James! It hadn't occurred to me to input CPM rather than logCPM which is why my df$NormalizedCounts didn't exceed 17ish in valu…
Answer: RPX PXDataset error
by
Laurent Gatto
1.5k
- From the URL in the error, it looks like you have the latest (or a recent) `rpx` version. It is generally recommended to add the output o…
Answer: Package name already exists due to previous issue
by
shepherl
3.1k
This has been resolved. There needed to be a manual intervention by the core team to remove the old issue from the issue tracker database.…
Votes
Answer: CPM after RUVseq
Comment: Merging two plated in R
Answer: Merging two plated in R
Answer: Merging two plated in R
A: Can we use glmQLFit instead of glmFit and then glmLRT in edgeR
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