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read.FCS
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0
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8
replies
2.3k
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unable to read FCS: expecting the bitwidth to be the same for all parameters
flowcore
read.fcs
8.7 years ago • updated 8.4 years ago
michael.gaspar
• 0
1
vote
1
reply
1.5k
views
flowCore: using read.FCS with which.lines is not time efficient?
flowcore
read.FCS
flowcytometry
updated 9.3 years ago by
Jiang, Mike
★ 1.3k • written 9.5 years ago by
skiaphrene
▴ 10
2
votes
2
replies
1.5k
views
Passing truncate_max_range=FALSE to read.ncdfFlowSet
ncdfFlow
flowCore
ncdfFlowSet
read.FCS
updated 4.0 years ago by
Jake Wagner
▴ 310 • written 4.0 years ago by
alavy
▴ 30
0
votes
1
reply
1.4k
views
read.flowSet error Error: vector::_M_range_check
software error
read.flowset()
read.fcs
flowcore
flowcytometry
8.2 years ago
e.bestion
• 0
1
vote
1
reply
1.4k
views
read.FCS memory limit? - $PnRNAis larger than R's numeric limit
flowCore
read.FCS
memory_limit
5.3 years ago
lloyd.izard
▴ 80
1
vote
1
reply
1.3k
views
Error when using read.FCS
compensation
flowCore
FlowCore
read.FCS
updated 3.2 years ago by
SamGG
▴ 350 • written 3.2 years ago by
Pepijn
• 0
0
votes
0
replies
1.0k
views
Uploading FCS files with flow cytometry data
software error
R
read.fcs
7.8 years ago
akisheev89
• 0
0
votes
1
reply
969
views
Error after assignPrelim(), CyTOF compenstation
CATALYST
flowCore
assignPrelim
Error in vapply
read.FCS
5.2 years ago
j.krop
• 0
0
votes
6
replies
877
views
flowCore >2.0 read.FCS results in $SPILLOVER error when reading certain FCS files (could it be a warning?)
read.FCS
flowCore
updated 4 months ago by
SamGG
▴ 350 • written 4 months ago by
das.traveller
• 0
0
votes
1
reply
684
views
Error in flowCore::read.FCS(): Error in uint2double(splitted, endian == "big") : vector
read.FCS
flowCore
2.5 years ago
Rainer
• 0
0
votes
2
replies
415
views
Cannot open Sysmex Partec CUbe 6 .fcs with read.FCS
Partec
read.FCS
flowCore
5 months ago
mrescan
• 0
0
votes
0
replies
361
views
Reading FCS files using read.FCS
read.FCS
read.flowSet
12 months ago
Pilid
• 0
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James W. MacDonald
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Are you commenting on the OP's question, or adding a different question? If the latter, please start a new post rather than piggybacking on…
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Use `bquote`. See section 4.6 in [the vignette][1]. [1]: https://bioconductor.org/packages/release/bioc/vignettes/EnhancedVolcano/in…
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by
SamGG
▴ 350
I was thinking about removing unwanted variations at the sample level (ie a transformation shared across genes) not at the gene level. Corr…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
James W. MacDonald
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That's an assumption used for normalization of a sample, not an assumption you can use for an individual model. We always normalize to atte…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
SamGG
▴ 350
Is useless the assumption that the majority of genes have no variation in expression (bearing in mind that they are distributed over the en…
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biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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