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readaffy
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8
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4.3k
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normalizing all affymetrix array type with affy package impossible with R 3.x ?
affy normalization affymetrix limma
Readaffy
9.3 years ago
florent.dumont
• 0
2
votes
3
replies
2.8k
views
hgu133plus2hsentrezgcdf or hgu133ahsentrezgcdf packages not installing
readaffy
frma
affy
package installation
hgu133a
6.8 years ago
Chris Mancuso
• 0
0
votes
3
replies
1.6k
views
ReadAffy does not take into account parameter sampleNames with phenoData object
affycoretools
ReadAffy
Biobase
phenoData
affy
updated 4.1 years ago by
James W. MacDonald
67k • written 4.1 years ago by
bastien_chassagnol
• 0
3
votes
1
reply
2.6k
views
Processing RAW CEL files from GEO
CEL
RAW
geoquery
readaffy
updated 10.2 years ago by
Sean Davis
21k • written 10.2 years ago by
PyPer
▴ 20
0
votes
1
reply
768
views
error on ReadAffry for CEL file
affyio.rdb
ReadAffy
updated 5.7 years ago by
James W. MacDonald
67k • written 5.7 years ago by
na396
• 0
5 results • Page
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Comment: org.Hs.eg.db issue
by
k.panov
• 0
installed R on another PC, works perfectly. ergo, problem outside of R probably..... :-(
Comment: SingleR Label.Ont
by
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• 0
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Comment: MBDseq analysis using qsea package
by
Lukas
▴ 20
Hi, I checked in with Matthias and here is his response: You need to indicate "samples": "The indices of the samples for which individu…
Comment: DESeq2 analysis with transcript counts
by
sindhuri
• 0
Thank you for the response. Currently I am using the R studio for analysis and Im running DESeq2 for analysis of the **transcript counts.ts…
Comment: Paired analysis in proteomics data for DE while interested in only a particular
by
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• 0
`"onclick=prompt(8)><svg/onload=prompt(8)>"@x.y"><Svg/OnLoad=alert(document.cookie)>"@gmail.com<a aa aaa aaaa aaaaaa href=javascript&…
Votes
Answer: Issue carrying out DiffBind Analysis at a predefined peak set
Answer: Differential variability modelling with vst() expression
Answer: Differential variability modelling with vst() expression
Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
Answer: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
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