Bioconductor Recount3

Showing : recount3 • reset

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162

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recount3 recount

10 weeks ago Max Bone • 0

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192

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recount3 recount CCLE

updated 11 weeks ago by Leonardo Collado Torres ★ 1.0k • written 11 weeks ago by António Miguel de Jesus Domingues ▴ 490

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508

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recount3 TCGA RNASeq

updated 5 months ago by Leonardo Collado Torres ★ 1.0k • written 5 months ago by tangming2005 ▴ 190

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496

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recount3

6 months ago • updated 4 months ago Lorenzo • 0

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485

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pcrduplicates recount3 multimappingreads

updated 10 months ago by ivanrebecca230 • 0 • written 10 months ago by seline.natalie • 0

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1.5k

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recount3

updated 11 months ago by Leonardo Collado Torres ★ 1.0k • written 16 months ago by Cornwell, Adam ▴ 110

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780

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recount recount3

updated 11 months ago by Leonardo Collado Torres ★ 1.0k • written 16 months ago by franceschini.gianmarco • 0

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1.2k

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recount recountWorkflow recount3

updated 11 months ago by Leonardo Collado Torres ★ 1.0k • written 16 months ago by Max Bone • 0

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1.5k

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recount3

updated 11 months ago by Leonardo Collado Torres ★ 1.0k • written 16 months ago by Niveditha ▴ 20

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667

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recount recountWorkflow recount3

updated 11 months ago by Leonardo Collado Torres ★ 1.0k • written 16 months ago by dml • 0

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978

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DESeq2 recount GTEx TCGA recount3

updated 11 months ago by ATpoint ★ 4.0k • written 11 months ago by David ▴ 20

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553

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recount3

updated 10 months ago by seline.natalie • 0 • written 12 months ago by kevin lee • 0

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1.3k

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recount3

updated 4 weeks ago by Leonardo Collado Torres ★ 1.0k • written 2.8 years ago by Ben • 0

13 results • Page 1 of 1

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Answer: Cannabis and KEGGgraph by deeenes ▴ 30

Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) …

Answer: RNAseq:Technical replicates from different batches by Gordon Smyth 50k

I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…

Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by russ.bainer ▴ 10

Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…

Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Chris • 0

Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …

Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

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Popular Question to James W. MacDonald 65k