Showing : recount3 • reset
0
votes
0
replies
165
views
Recount3 error downloading data
recount3 recount
11 weeks ago Max Bone • 0
1
vote
1
reply
196
views
Transcript level expression for CCLE
recount3 recount CCLE
updated 12 weeks ago by ★ 1.0k • written 12 weeks ago by ▴ 490
0
votes
2
replies
518
views
TCGA counts to TPM from recount3 do not seem to right
recount3 TCGA RNASeq
updated 5 months ago by ★ 1.0k • written 6 months ago by ▴ 190
0
votes
2
replies
504
views
recount3 monorail pipeline version
recount3
6 months ago • updated 4 months ago Lorenzo • 0
0
votes
2
replies
488
views
Recount3: PCR duplicates
pcrduplicates recount3 multimappingreads
updated 10 months ago by • 0 • written 10 months ago by • 0
0
votes
3
replies
1.5k
views
Recount3 error with default "recount3_url" option
recount3
updated 11 months ago by ★ 1.0k • written 17 months ago by ▴ 110
0
votes
2
replies
785
views
Recount3 data download problem
recount recount3
updated 11 months ago by ★ 1.0k • written 16 months ago by • 0
2
votes
6
replies
1.3k
views
Unable to load data from duffel.rail
recount recountWorkflow recount3
updated 11 months ago by ★ 1.0k • written 16 months ago by • 0
2
votes
11
replies
1.5k
views
Not able to download recount3 data
recount3
updated 11 months ago by ★ 1.0k • written 16 months ago by ▴ 20
0
votes
2
replies
674
views
Cannot download data from IDIES links
recount recountWorkflow recount3
updated 11 months ago by ★ 1.0k • written 16 months ago by • 0
1
vote
3
replies
993
views
Can i perform DEseq2 from 2 different rse objects download from RECOUNT database
DESeq2 recount GTEx TCGA recount3
updated 11 months ago by ★ 4.0k • written 11 months ago by ▴ 20
0
votes
1
reply
555
views
Recount3 data correspond to TCGA data
recount3
updated 10 months ago by • 0 • written 12 months ago by • 0
2
votes
5
replies
1.3k
views
Downloading count matrix for full recount3 dataset
recount3
updated 5 weeks ago by ★ 1.0k • written 2.8 years ago by • 0
13 results • Page 1 of 1
Recent ...
Replies
Comment: minfi::read.metharray.exp by clacarion • 0
Thank you for your response Basti ! I add all the idat files in a unique folder called "idat" and add it in my path ```r > list.files("…
Answer: List of Deprecated Packages for Bioc3.19 by shepherl 3.8k
singleCellTK has been fixed and will remain in Bioconductor
Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10
Yes, I'm working only with genes from terpenoids pathway (14 genes), so I can't use enrichGO? Can you recommend a package or something like…
Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10
Your awnser at Cannabis orgDb solve my problems using enrichGO by far. I'm underdegree biotechnology student, and I learning bioinformatic…
Comment: Trying to use enrichGO by Guido Hooiveld ★ 3.9k
It is indeed better. Anyway, did you notice this part in the output from `str(ortologos_filtrados)`: `$Gene.ID : int 115709372 115716460 …
Votes
Comment: Trying to use enrichGO
Answer: Cannabis OrgDb
DESeq2: How to find out how well the model fits the data?
Comment: DESeq2 - dispersion estimation when there is none
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
Awards • All
Popular Question to i.sudbery ▴ 30
Scholar to Michael Love 41k
Popular Question to shepherl 3.8k
Scholar to Gordon Smyth 50k
Popular Question to taur.vil • 0
Locations • All
United Kingdom, just now
France, 1 minute ago
United States, 11 minutes ago
United States, 12 minutes ago
UPF, Barcelona, Spain, 14 minutes ago
Traffic: 854 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6