Showing : referencecn.mops • reset
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Mean and median values in cn.mops cnvs output
cn.mops referencecn.mops
updated 5.3 years ago by 0 • written 5.4 years ago by • 0
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660
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How to interpret out of referencecn.mops
referencecn.mops cn.mops
5.7 years ago eddie.kaho.ho • 0
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about the runs with cn.mops
cn.mops referencecn.mops
6.7 years ago • updated 6.6 years ago Bogdan ▴ 670
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cn.mops encounter negative width problem
cn.mops referencecn.mops
updated 7.0 years ago by ▴ 540 • written 7.0 years ago by • 0
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R code for cn.mops -- if a chromosome does not have CNV ?
cn.mops referencecn.mops
updated 7.0 years ago by ▴ 540 • written 7.2 years ago by ▴ 670
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cn.mops: NA in the output of referencecn.mops
cn.mops referencecn.mops
updated 7.4 years ago by ▴ 540 • written 7.4 years ago by ▴ 90
6 results • Page 1 of 1
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Comment: Trying to use enrichGO by Guido Hooiveld ★ 3.9k
Nothing would prevent you from using the `enrichGO` function (or any other function for over-representation analysis [ORA]) with only 14 ge…
Comment: Different Shrunk Log2FC according with reference by andrebolerbarros ▴ 20
Thanks @atpoint for your answer! The issue with that is then it severely hinders the possiblity of using `apeglm` shrinking approach, sinc…
Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge by ATpoint ★ 4.0k
The error that is relevant is `Aborted (core dumped)`. This line 2890 refers to the C source code that throws the error, it is not relevant…
Answer: Different Shrunk Log2FC according with reference by ATpoint ★ 4.0k
Please see: https://support.bioconductor.org/p/p134551/ I asked basically the same before. In short, reference level might have an influ…
Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by Gayatri • 0
What I meant is even after deleting the NCBI.sqlite file, and re-running the script, an empty NCBI.sqlite file (0 kb) is created which is c…
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Subset DEXSeqDataSet In DEXSeq
How to get all possible comparisons in DiffBind
Comment: get BM error
Answer: Citation for edgeR user guide
Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)
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