Bioconductor Regioner

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1.0k

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annotatr regioneR gkmSVM

updated 5 months ago by Mahmoud • 0 • written 3.3 years ago by rohitsatyam102 ▴ 20

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868

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regioneR granges iranges

updated 3.5 years ago by bernatgel ▴ 150 • written 3.9 years ago by Angel Liang • 0

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665

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regioneR

updated 4.6 years ago by bernatgel ▴ 150 • written 4.6 years ago by shoko • 0

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878

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regioneR

4.8 years ago AlejandroMA • 0

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634

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regioneR

updated 5.0 years ago by bernatgel ▴ 150 • written 5.0 years ago by Miss Agnieszka Aleksandra Golicz ▴ 40

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644

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regioneR

updated 5.0 years ago by bernatgel ▴ 150 • written 5.0 years ago by Miss Agnieszka Aleksandra Golicz ▴ 40

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647

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regioner

5.8 years ago peds09 • 0

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815

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regioner permtest

6.0 years ago linuxborg2 • 0

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1.9k

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regioneR permTest

6.1 years ago linuxborg2 • 0

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1.2k

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regioneR

updated 6.4 years ago by bernatgel ▴ 150 • written 6.4 years ago by gonzalpk ▴ 10

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3.1k

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regioner overlappingpeaks

updated 7.0 years ago by bernatgel ▴ 150 • written 7.0 years ago by tharveshliyakat ▴ 10

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1.2k

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regioneR

updated 7.3 years ago by bernatgel ▴ 150 • written 7.3 years ago by Vinicius Henrique da Silva ▴ 40

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1.2k

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shuffle regioner seqinr

updated 7.4 years ago by Martin Morgan 25k • written 7.4 years ago by Dimitris Polychronopoulos ▴ 80

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1.3k

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regioneR

updated 7.7 years ago by bgel ▴ 30 • written 7.7 years ago by andreucat91 • 0

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1.3k

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regioner

updated 8.0 years ago by Martin Morgan 25k • written 8.0 years ago by rcavalca ▴ 140

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945

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genomicranges regioneR width

updated 8.2 years ago by bernatgel ▴ 150 • written 8.2 years ago by Ludo Pagie ▴ 40

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1.8k

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regioneR GRanges GCcontent

updated 8.4 years ago by bernatgel ▴ 150 • written 8.4 years ago by Dimitris Polychronopoulos ▴ 80

17 results • Page 1 of 1

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Comment: Memory errors using read.bismark? by Peter Hickey ▴ 700

> Only one thing, my data are actually CpG methylation :) No, the file you sent me is CX methylation (i.e. CpA, CpC, CpG, CpT), as is clea…

Comment: DEG with low counts by Rajat • 0

Dear Dr. Michael Thanks for you quick reply. I appreciate it. Attached is the plotcounts for one gene. I am experiencing like this in oth…

Comment: Light difference when using coef vs omit a group when compare 3 groups. by Chris • 0

Hi Gordon, thank you so much for your guide! I check my data as you said there is no difference in my data. This is the MDS plot at genes l…

Comment: How to correct for known and surrogate variables in DESeq2? by Michael Love 41k

To question 3: if you model technical variation using only ~group vs ~1, then it will be correlated with known technical variables, which y…

Answer: flowStats Search Error by shepherl 3.8k

We are aware of an issue with bioconductor.org search and are investigating. We apologize for an inconvenience this is causing.

Votes

Answer: Light difference when using coef vs omit a group when compare 3 groups.

C: Add new columns to DESeqResults from text file by matching rownames.

Answer: geneList error in clusterprofiler

Comment: Memory errors using read.bismark?

Comment: Not fully paired differential gene expression analysis

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