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News: List of Deprecated Packages for Bioc3.19
Release Devel ExperimentData Software
7 weeks ago • updated 1 hour ago shepherl 3.8k
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News: Important Release 3.18 Freeze Announcment
Release release Bioconductor Bioconducto
7 days ago shepherl 3.8k
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News: Bioconductor 3.19 Release Schedule
Release release Software
6 weeks ago • updated 24 days ago shepherl 3.8k
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190
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Rcpp compilation error
Release Rcpp
updated 6 weeks ago by ★ 4.0k • written 6 weeks ago by ▴ 40
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News: Note about packages submitted for Bioconductor 3.19
Release Submission release Bioconductor
11 weeks ago shepherl 3.8k
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News: Bioconductor 3.18 is Released!
Packages Bioconductor Release Software
written 5 months ago by 3.8k
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rnaSeqGene workflow not available in Bioconductor 3.18
rnaseqGene Bioconductor3.18 DifferentialExpression release
updated 5 months ago by 41k • written 5 months ago by ▴ 60
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News: Important Bioconductor Release 3.18 deadlines this week
Release Devel release devel
updated 6 months ago by ★ 3.9k • written 6 months ago by 3.8k
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News: Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
db0 release Annotation
6 months ago kayla.interdonato ▴ 160
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News: Bioconductor 3.18 Release Schedule
Release Software release
7 months ago shepherl 3.8k
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News: Final List of Deprecated Package Bioc 3.9
deprecation release software experimentData News
written 5.1 years ago by 3.8k
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News: Bioconductor 3.17 is Released!
Packages Release Bioconductor Software
11 months ago shepherl 3.8k
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News: Final List of Deprecated Packages for Bioc3.7
deprecate package release News
written 6.1 years ago by 3.8k
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Comment: DESeq filtering specific to contrasts by Michael Love 41k
It will likely not filter it out, but really the per-dataset details would affect the results.
Comment: DESeq filtering specific to contrasts by Carlin95 • 0
Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…
Comment: FilterByExpr low counts with small sample size by Jonathan ▴ 10
Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Seyram M. • 0
Thank you very much for your reply! I will do so. Kind regards, Seyram
Comment: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0` by isaac.vock • 0
Thank you for your response. I can confirm that setting `-t exon` and/or removing `-s 1` and adding `-O` has no impact on the number of suc…
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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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