Biostar Repitools

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repitools promoter tss annotation

4.4 years ago Ryan C. Thompson 7.8k

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repitools bioconductor cpgDensityCalc

5.3 years ago divyswar01 • 0

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568

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Baymeth methylation MBD-seq Repitools

6.2 years ago pm2015 • 0

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624

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repitools

7.1 years ago Matthias Lienhard ▴ 220

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BSgenome BSgenome Repitools BSgenome BSgenome Repitools

8.4 years ago Dario Strbenac ★ 1.5k

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BSgenome BSgenome Repitools BSgenome BSgenome Repitools

8.5 years ago Jaritz,Markus ▴ 20

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GO Repitools GO Repitools

updated 8.7 years ago by Dario Strbenac ★ 1.5k • written 8.7 years ago by Tim Smith ★ 1.1k

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685

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limma Repitools limma Repitools

9.5 years ago Guest User ★ 12k

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4.7k

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Alignment convert Repitools Alignment convert Repitools

updated 9.6 years ago by Dario Strbenac ★ 1.5k • written 9.6 years ago by José Luis Lavín ▴ 280

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BSgenome BSgenome Repitools BSgenome BSgenome Repitools

updated 10.8 years ago by Chao-Jen Wong ▴ 580 • written 10.8 years ago by Guest User ★ 12k

10 results • Page 1 of 1

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Answer: Design and contrast matrices for analyzing the effect of two factors of interest by Gordon Smyth 46k

> In a typical regression, I would just add them to the model when estimating my coefficients of interest Why not do the same with limma? …

Comment: TPM normalization starting with read counts by Gordon Smyth 46k

> So you think my method in TPM normalization that I introduced above is not good? Your computation of RPKM using edgeR is fine, provided …

Comment: error in package GenVisR while installing by 堃 • 0

Package ‘FField’ was removed from the CRAN repository.[enter link description here][1] I installed FField by using remotes::install_github…

Comment: DESeq 2 failes to load by Ruggero • 0

This solved the error, in case someone else is having compilation errors from installing RSQllite: install.packages('RSQLite', repos='http…

Comment: pathview says my nonmodel species is unknown: "species invalid" by Guido Hooiveld ★ 3.3k

A while ago a faced the same for another non-model organism. I was able to get it working using a 'hack'. This hack is nothing more than m…

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Answer: How to remove dendrogram from pheatmaps?

A: conceptual question about FDR, FDR adjusted p-value and q-value

A: How to select summit size for histone ChiP-Seq in Diffbind

Answer: Unable to download supplementary files from GSE146963 using GEOquery

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Teacher to Guido Hooiveld ★ 3.3k

Popular Question to Marwaha, Shruti marwahsi ▴ 40