Bioconductor Replicates

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5.1k

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DESEQ deseq2 deseq replicates biologicalreplicates

8.4 years ago wd ▴ 30

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3.2k

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deseq2 replicates error DESeqDataSetFromMatrix

updated 5.0 years ago by Michael Love 41k • written 5.0 years ago by Yonatan Amzaleg • 0

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2.8k

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limma proteomics replicates

updated 5.7 years ago by Aaron Lun ★ 28k • written 5.7 years ago by ivansilbern • 0

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2.6k

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deseq2 R bioconductor RNA_Seq replicates

updated 4.4 years ago by swbarnes2 ★ 1.3k • written 4.4 years ago by aishu.jp ▴ 30

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2.3k

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edgeR rna-seq replicates

updated 9.2 years ago by James W. MacDonald 65k • written 9.2 years ago by eb0906 • 0

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2.0k

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limma duplicatecorrelation replicates

7.0 years ago rwalke13 • 0

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1.8k

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rnaseq deseq2 differential expression batch effect replicates

updated 4.6 years ago by Michael Love 41k • written 4.6 years ago by Nik dAK ▴ 10

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1.6k

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deseq2 replicates

updated 7.2 years ago by Michael Love 41k • written 7.2 years ago by le2336 ▴ 20

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1.2k

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rnbeads replicates

updated 8.4 years ago by rnbeads • 0 • written 8.4 years ago by Jon Manning ▴ 40

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889

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replicates

8.7 years ago efratdahan21 • 0

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857

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conditions replicates SmallRNAData DESeq2

updated 3 months ago by Kevin Blighe ★ 3.9k • written 4 months ago by samer ▴ 10

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624

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DESeq2 timecoursedata replicates

updated 13 months ago by Michael Love 41k • written 13 months ago by fepesanz8 • 0

12 results • Page 1 of 1

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Answer: Cannabis and KEGGgraph by deeenes ▴ 30

Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…

Answer: RNAseq:Technical replicates from different batches by Gordon Smyth 50k

I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…

Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by russ.bainer ▴ 10

Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…

Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Chris • 0

Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …

Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

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Popular Question to James W. MacDonald 65k