Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
reproducibility
•
reset
0
votes
16
replies
2.5k
views
Variance between runs of Rsubread
rsubread
alignment
reproducibility
7.5 years ago
Isaac Virshup
• 0
2
votes
4
replies
1.8k
views
no date tag included in docker ps output
docker
reproducibility
8.6 years ago
anton.kratz
▴ 60
0
votes
3
replies
2.2k
views
Locating older version of Bioconductor packages
reproducibility
archive
source code
updated 8.5 years ago by
Dan Tenenbaum
★ 8.2k • written 8.5 years ago by
brucbruc
• 0
1
vote
2
replies
1.4k
views
Package archive for the purpose of reproducible research
archive
reproducibility
updated 8.4 years ago by
Martin Morgan
25k • written 8.4 years ago by
robert.bruccoleri
▴ 10
3
votes
2
replies
1.1k
views
DESeq2: Question regarding changes between Bioconductor 3.2 and 3.4 or recent version changes
deseq2
new version
bioconductor
software error
reproducibility
7.5 years ago
Daniel Elsner
• 0
3
votes
2
replies
768
views
Does a specific bioconductor version constrain versions of non-bioconductor packages?
reproducibility
versions
installing
base-r
updated 4.1 years ago by
Mike Smith
★ 6.5k • written 4.1 years ago by
Yannick Wurm
▴ 40
0
votes
0
replies
784
views
Which tools should we use to make research reproducible?
bioconductor
R
reproducibility
7.4 years ago
lwumd1400
• 0
7 results • Page
1 of 1
Recent ...
Replies
Answer: Cannabis and KEGGgraph
by
deeenes
▴ 30
Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…
Answer: RNAseq:Technical replicates from different batches
by
Gordon Smyth
50k
I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…
Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param
by
russ.bainer
▴ 10
Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
by
Chris
• 0
Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …
Comment: How to retrieve detailed regression results from deseq2
by
Weiqian
▴ 10
Hi Michael, thanks for the answer! I'll have a look : )
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
Awards
• All
Popular Question
to
James W. MacDonald
65k
Popular Question
to
shepherl
3.8k
Popular Question
to
BioinfGuru
▴ 30
Popular Question
to
Gordon Smyth
50k
Scholar
to
Peter Hickey
▴ 740
Locations
• All
Heidelberg,
7 minutes ago
France,
10 minutes ago
WEHI, Melbourne, Australia,
11 minutes ago
United States,
15 minutes ago
Ghana/KNUST,
55 minutes ago
Traffic: 637 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6