Bioconductor Results.ranges

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dmrcate cpgs results.ranges DMRcate

updated 3.5 years ago by Tim Peters ▴ 140 • written 3.5 years ago by landenshanie ▴ 40

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Comment: ClusterProfiler - enrichKEGG on specific pathways by EvaLan • 0

Hey bekah, I wonder if you have found the solution to solve this issue? Best wishes, EvaLan

Comment: Why is DMRcate not available for Bioconductor version 3.18? by Gordon Smyth 48k

That's a good question. On the DMRcate landing page, one can see that the "Source package" file is missing, meaning that installation in Un…

Comment: Unlog transformed data in DESeq2 by Gordon Smyth 48k

The RUVIII people themselves use limma ( https://doi.org/10.1093/nar/gkz433 ). But please, post your question as a question. That would be …

Comment: DESeq2 - groups with biological replicates from the same patient by Oscar • 0

Yes I see that. So, to expand, if strong grouping IS seen, then the ```~condition``` approach is not appropriate, as will likely lead to po…

Comment: DESeq2 - groups with biological replicates from the same patient by Oscar • 0

This seems a very odd response to what seemed to be a very reasonable question

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Scholar to Assa Yeroslaviz ★ 1.5k