Showing : rgraphviz • reset
3
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4
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1.4k
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Exporting graphNEL into Cytoscape using RCy3 fails with 'arguments imply differing number of rows'
RCy3 Cytoscape Rgraphviz GOstats
5.0 years ago • updated 4.9 years ago Matthew Thornton ▴ 350
3
votes
6
replies
3.2k
views
Rgraphviz installation problem
rgraphviz Rgraphviz
9.6 years ago Janet Young ▴ 740
2
votes
2
replies
1.3k
views
Rgraphviz installation failing
software error Rgraphviz
updated 4.2 years ago by ★ 6.5k • written 4.2 years ago by • 0
2
votes
0
replies
1.4k
views
Problem using Rgraphviz (edge weights going missing).
GO graph Rgraphviz GO graph Rgraphviz
15.5 years ago Dan Bolser ▴ 40
2
votes
4
replies
1.8k
views
Error installing Rgraphviz
installation rgraphviz
updated 8.4 years ago by 65k • written 8.4 years ago by • 0
2
votes
7
replies
1.5k
views
Error when installing Rgraphviz on Centos
Rgraphviz Installation Error
4.6 years ago jmh5ad ▴ 40
2
votes
1
reply
1.7k
views
Rgraphviz install problem.HELP!!!!!
Rgraphviz Rgraphviz
updated 10.0 years ago by ▴ 30 • written 10.0 years ago by ★ 13k
1
vote
1
reply
1.7k
views
[SOLVED] Problem with the installation of Rgraphviz
Graphviz Rgraphviz
2.4 years ago c.bell.lu • 0
1
vote
3
replies
1.4k
views
Installation of Rgraphviz fails - missing gvc.h
software error Rgraphviz
updated 8 months ago by • 0 • written 4.0 years ago by • 0
1
vote
2
replies
1.3k
views
Rgraphviz - issue with edge label when using multiple edges between two nodes
rgraphviz
updated 8.7 years ago by ★ 6.5k • written 8.7 years ago by • 0
1
vote
4
replies
3.6k
views
Rgraphviz fontsize
GO graph Rgraphviz GO graph Rgraphviz
updated 15.6 years ago by 6.7k • written 15.6 years ago by ▴ 80
1
vote
1
reply
1.4k
views
Rgraphviz and margins
graph Rgraphviz graph Rgraphviz
updated 8.3 years ago by • 0 • written 12.8 years ago by ▴ 80
0
votes
3
replies
1.1k
views
Recent changes to Bioconductor packages
genefilter affy graph Rgraphviz limma annaffy genefilter affy graph Rgraphviz limma
20.6 years ago madman@jimmy.harvard.edu ▴ 850
0
votes
1
reply
990
views
installatioin problem
rhdf5 reposTools graph Rgraphviz rhdf5 reposTools graph Rgraphviz
updated 20.7 years ago by ★ 3.9k • written 20.7 years ago by ▴ 20
0
votes
0
replies
1.1k
views
How to use the same node layout for a set of graph plots using graph and Rgraphviz?
Cancer graph Rgraphviz Cancer graph Rgraphviz
16.2 years ago Rand, Hugh ▴ 50
0
votes
0
replies
922
views
Problems with getBioC (reposTools, really) and package Rgraphviz
reposTools graph Rgraphviz reposTools graph Rgraphviz
20.8 years ago Rafal Kustra ▴ 10
0
votes
4
replies
1.3k
views
Compilation problem installing Bioconductor (RGraphviz)
graph Rgraphviz graph Rgraphviz
updated 20.9 years ago by ★ 5.5k • written 20.9 years ago by ▴ 80
0
votes
3
replies
1.4k
views
Rgraphviz installation problem on " chmod: cannot access '~/library/Rgraphviz/libs/*': No such file or directory"
Rgraphviz Rgraphviz
updated 16.5 years ago by ▴ 510 • written 16.5 years ago by ▴ 130
0
votes
4
replies
1.7k
views
[R-SIG-Mac] Mac os x graphviz-Rgraphviz problem
Biobase annotate geneplotter graph Rgraphviz BUS Biobase annotate geneplotter graph BUS
updated 17.2 years ago by ★ 7.4k • written 17.2 years ago by ★ 6.5k
0
votes
2
replies
812
views
errors compiling Rgraphviz
Rgraphviz Rgraphviz
updated 20.4 years ago by ★ 3.9k • written 20.4 years ago by ★ 1.1k
0
votes
0
replies
599
views
directed graph with Rgraphviz
Rgraphviz Rgraphviz
20.4 years ago Laurent Gautier ★ 2.3k
0
votes
3
replies
1.2k
views
Recent changes to Bioconductor packages
Biobase Ruuid DynDoc tkWidgets affy graph Rgraphviz AnnBuilder RBGL PROcess Biobase
21.1 years ago • updated 21.0 years ago madman@jimmy.harvard.edu ▴ 850
0
votes
3
replies
1.3k
views
Recent changes to Bioconductor packages
reposTools graph Rgraphviz simpleaffy impute reposTools graph Rgraphviz simpleaffy impute
20.2 years ago madman@jimmy.harvard.edu ▴ 850
0
votes
3
replies
1.1k
views
Problem installing Rgraphviz
Rgraphviz Rgraphviz
updated 20.0 years ago by ★ 3.9k • written 20.0 years ago by ▴ 430
0
votes
1
reply
879
views
Problems with loading Rgraphviz library
Rgraphviz Rgraphviz
updated 20.0 years ago by ★ 3.9k • written 20.0 years ago by ▴ 10
0
votes
1
reply
769
views
problem loading Rgraphviz library
GO Rgraphviz GO Rgraphviz
updated 19.9 years ago by ★ 3.9k • written 19.9 years ago by ▴ 10
0
votes
1
reply
920
views
Rgraphviz installation problems
Rgraphviz Rgraphviz
updated 19.9 years ago by ★ 3.9k • written 19.9 years ago by ▴ 20
0
votes
1
reply
731
views
Rgraphviz and MacOS
Rgraphviz Rgraphviz
19.9 years ago Sean Davis 21k
0
votes
2
replies
925
views
Regarding Tcltk and CDF error
Cancer cdf rhdf5 Rgraphviz Cancer cdf rhdf5 Rgraphviz
updated 19.8 years ago by ▴ 1000 • written 19.9 years ago by ★ 1.1k
0
votes
9
replies
1.4k
views
Rgraphviz for Windows
Rgraphviz GOstats Rgraphviz GOstats
updated 19.7 years ago by ★ 3.9k • written 19.7 years ago by ▴ 20
0
votes
3
replies
1.0k
views
Rgraphviz build problems
Rgraphviz Rgraphviz
updated 20.5 years ago by ▴ 810 • written 20.5 years ago by 21k
0
votes
0
replies
932
views
installation problems
Rgraphviz Rgraphviz
20.5 years ago Yectli A Huerta ▴ 10
0
votes
4
replies
1.0k
views
Recent changes to Bioconductor packages
MultiChannel tkWidgets affy Rgraphviz MultiChannel tkWidgets affy Rgraphviz
21.2 years ago • updated 21.1 years ago madman@jimmy.harvard.edu ▴ 850
0
votes
2
replies
1.2k
views
Rgraphviz edge attributes can't be changed on Mac
Biobase geneplotter Rgraphviz Biobase geneplotter Rgraphviz
updated 16.5 years ago by ▴ 540 • written 16.5 years ago by ★ 1.6k
0
votes
1
reply
1.1k
views
OS X, Rgraphviz, bioconductor
graph Rgraphviz PROcess graph Rgraphviz PROcess
updated 19.5 years ago by ▴ 430 • written 19.5 years ago by ▴ 30
0
votes
0
replies
721
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Rgraphviz question
graph Rgraphviz graph Rgraphviz
19.5 years ago Sean Davis 21k
0
votes
1
reply
1.2k
views
RE: Bioconductor Digest, Vol 8, Issue 15
Microarray Clustering Cancer affy graph SAGElyzer Rgraphviz Rdbi RBGL Microarray Cancer
updated 20.6 years ago by ▴ 180 • written 20.6 years ago by ▴ 160
0
votes
7
replies
1.1k
views
Rgraphviz warnings in R-2.0
Rgraphviz Rgraphviz
updated 19.5 years ago by ★ 3.9k • written 19.5 years ago by ★ 1.1k
0
votes
2
replies
3.7k
views
More advance node labeling in Graphviz
Rgraphviz Rgraphviz
updated 19.5 years ago by ★ 13k • written 19.5 years ago by ▴ 400
0
votes
2
replies
1.7k
views
Installation Problem on OS X
GO geneplotter graph Rgraphviz pamr globaltest GO geneplotter graph Rgraphviz pamr
updated 19.4 years ago by ▴ 680 • written 19.4 years ago by ▴ 10
0
votes
3
replies
1.1k
views
(no subject)
Rgraphviz Rgraphviz
updated 19.3 years ago by ★ 1.3k • written 19.4 years ago by ▴ 20
0
votes
0
replies
953
views
Problems building Bioconductor 1.5 on RHAW 3
Rgraphviz Rgraphviz
19.3 years ago Steve Simmons ▴ 10
0
votes
1
reply
679
views
ontoTools and Rgraphviz
Rgraphviz ontoTools Rgraphviz ontoTools
updated 19.3 years ago by ★ 5.5k • written 19.3 years ago by ▴ 50
0
votes
1
reply
1.2k
views
Bioconductor Install Problems
Rgraphviz KEGGSOAP Rgraphviz KEGGSOAP
updated 19.3 years ago by ★ 7.4k • written 19.3 years ago by ▴ 10
0
votes
3
replies
1.1k
views
Problem whith Rgraphviz
Rgraphviz Rgraphviz
updated 19.1 years ago by ★ 1.1k • written 19.1 years ago by ▴ 10
0
votes
2
replies
682
views
Rgraphviz error
Rgraphviz Rgraphviz
updated 19.1 years ago by ★ 7.4k • written 19.1 years ago by ▴ 10
0
votes
0
replies
772
views
Re: Rghraphviz
Rgraphviz PROcess Rgraphviz PROcess
19.0 years ago Seth Falcon ★ 7.4k
0
votes
3
replies
928
views
How to plot the graph object
graph Rgraphviz graph Rgraphviz
updated 19.0 years ago by ▴ 10 • written 19.0 years ago by ▴ 40
0
votes
0
replies
954
views
the edgeNames( ), and the label for the edge in a node-edge plot created in Graphviz
graph Rgraphviz convert graph Rgraphviz convert
19.0 years ago Seth Falcon ★ 7.4k
0
votes
4
replies
1.2k
views
install Rgraphviz and graphviz MAC OSX 10.3.5
Rgraphviz Rgraphviz
updated 19.5 years ago by ★ 5.5k • written 19.5 years ago by ▴ 30
50 results • Page 1 of 1
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Answer: DESEQ2 IHW and Apelgm method for Shrinkage (adding s values to FDR) by Michael Love 41k
> I got many p values that had "1.000000e+00" and padj "1" and stat of "0" when I added the Log threshold of LFC >1 and LFC < -1...is this …
Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10
With all my love, thank you Guido, GOxploreR beeing a big ally for me. I don't know how to be grateful right now.
Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k
You didn't generate it with an experiment, you made it up: Your PCA doesn't look like a good RNASeq experiment, because it's not.
Answer: Opposite sign of LFC in count plots of DEGs (DESeq2) by swbarnes2 ★ 1.3k
Your contrast is comparing LGR5 to Homeostasis. The bottom 2 are fine, it's the top one that is wrong. Are you sure this step isn't misla…
Comment: get BM error by James W. MacDonald 65k
I believe you need NCBI Gene IDs for KEGG, in which case you may need to map. The three genes you have shown here don't map, and of those t…
Votes
Answer: How to retrieve gene ontology GO class from gene list?
Answer: How to retrieve gene ontology GO class from gene list?
C: when to apply quantile normalization with voom in limma/voom framework with RNA-
A: How to know if I should use voomWithQualityWeights() or not?
A: Weird results (ribosomal proteins / Y-linked genes) in limma/voom
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