Biostar Rhtslib

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336

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Rhts Rhtslib

22 months ago anand_mt ▴ 80

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6.0k

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Rhtslib installation error zlib

updated 3.4 years ago by leoadam014 • 0 • written 4.3 years ago by boboshaq • 0

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1.3k

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software error Rhtslib zlib.h

updated 3.4 years ago by Hervé Pagès 16k • written 3.4 years ago by juandenciso14 • 0

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1.5k

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biocLite package installation withr biocinstaller rhtslib

updated 4.4 years ago by Martin Morgan 25k • written 4.4 years ago by merv ▴ 60

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1.3k

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Rhtslib

updated 4.7 years ago by Hervé Pagès 16k • written 4.7 years ago by Aaron Lun ★ 28k

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872

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diffhic csaw Rhtslib

updated 5.3 years ago by Martin Morgan 25k • written 5.3 years ago by favorov • 0

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1.5k

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Rhtslib htslib package

updated 5.5 years ago by Martin Morgan 25k • written 5.5 years ago by Shian Su ▴ 40

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Comment: pathview says my nonmodel species is unknown: "species invalid" by Guido Hooiveld ★ 3.5k

Does a restart of R help? Does a reinstall of the library `png` help? In a fresh R-session, what is the output from `BiocManager::valid()…

Comment: Don't let TopGo to trimm long GO names by James W. MacDonald 62k

Did you not notice that this has been answered *as part of this thread that you posted in?*

Comment: pathview says my nonmodel species is unknown: "species invalid" by nute11a • 0

Hi Luo, thank you so much for your helpful comment. While I was able to get this to work and visualize my interesting KEGG pathways (yay!) …

Comment: Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA) by Wolfgang Huber 13k

Hi Ben, your first step should be to upgrade to the current versions of R and Bioconductor. There is really little point in trouble-shooti…

Answer: Is ther an annotation package for sheep (Ovis aries) by Guido Hooiveld ★ 3.5k

Yes, there is! An `EnsDb` for sheep can be obtained through the so-called `AnnotationHub`. See James' and my posts in the thread linked t…

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Comment: Error in .order_seqlevels(chrom_sizes[, "chrom"]) : !anyNA(m32) is not TRUE

FDR and padj in deseq and edger

Comment: Mutect version, matched normal and manual curation in PureCN

Answer: Is ther an annotation package for sheep (Ovis aries)

Awards • All

Scholar to James W. MacDonald 62k

Commentator to Michael Love 39k