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Removal of noise creating eigengenes and eigenarrays from the Dataset
eigengenes
limma
biosvd
rice
5.0 years ago
ravisaroch
• 0
0
votes
1
reply
737
views
biomaRt error message
biomart
bioconductor
rice
5.5 years ago
Didi
▴ 10
0
votes
2
replies
1.6k
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Cytoband information for rice
rice
cytoband
circlize
ggbio
ideogram
6.8 years ago
Didi
▴ 10
1
vote
2
replies
1.3k
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biomaRt - rice genes database not working
biomart
gramene
rice
updated 7.5 years ago by
Thomas Maurel
▴ 800 • written 7.5 years ago by
maialiaeb
• 0
4 results • Page
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Comment: minfi::read.metharray.exp
by
clacarion
• 0
Thank you for your response Basti ! I add all the idat files in a unique folder called "idat" and add it in my path ```r > list.files("…
Answer: List of Deprecated Packages for Bioc3.19
by
shepherl
3.8k
singleCellTK has been fixed and will remain in Bioconductor
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
Yes, I'm working only with genes from terpenoids pathway (14 genes), so I can't use enrichGO? Can you recommend a package or something like…
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
Your awnser at Cannabis orgDb solve my problems using enrichGO by far. I'm underdegree biotechnology student, and I learning bioinformatic…
Comment: Trying to use enrichGO
by
Guido Hooiveld
★ 3.9k
It is indeed better. Anyway, did you notice this part in the output from `str(ortologos_filtrados)`: `$Gene.ID : int 115709372 115716460 …
Votes
Comment: Trying to use enrichGO
Answer: Cannabis OrgDb
DESeq2: How to find out how well the model fits the data?
Comment: DESeq2 - dispersion estimation when there is none
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
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