Biostar Rlelist

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1.1k

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delayedarray rlelist rle

updated 5.3 years ago by Peter Hickey ▴ 630 • written 5.3 years ago by davide risso ▴ 920

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genomicranges biocgenerics rlelist genomicvars iranges

updated 5.4 years ago by Hervé Pagès 16k • written 5.4 years ago by Devin King ▴ 20

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bug genomicranges granges rlelist coverage

updated 5.0 years ago by Hervé Pagès 16k • written 5.0 years ago by xiaotong.yao23 ▴ 10

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419

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Views IRanges GRanges RleList

updated 16 months ago by Mike Smith ★ 5.9k • written 16 months ago by Assa Yeroslaviz ★ 1.5k

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963

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Views genomicalignments IRangesList coverage RleList

updated 6.5 years ago by Hervé Pagès 16k • written 6.5 years ago by ccanchaya • 0

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766

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rlelist ifelse

updated 6.1 years ago by theobroma22 ▴ 10 • written 6.1 years ago by maltethodberg ▴ 140

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574

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iranges s4vectors rle rlelist

4.6 years ago endrebak85 ▴ 30

7 results • Page 1 of 1

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Comment: pathview says my nonmodel species is unknown: "species invalid" by Guido Hooiveld ★ 3.5k

Does a restart of R help? Does a reinstall of the library `png` help? In a fresh R-session, what is the output from `BiocManager::valid()…

Comment: Don't let TopGo to trimm long GO names by James W. MacDonald 62k

Did you not notice that this has been answered *as part of this thread that you posted in?*

Comment: pathview says my nonmodel species is unknown: "species invalid" by nute11a • 0

Hi Luo, thank you so much for your helpful comment. While I was able to get this to work and visualize my interesting KEGG pathways (yay!) …

Comment: Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA) by Wolfgang Huber 13k

Hi Ben, your first step should be to upgrade to the current versions of R and Bioconductor. There is really little point in trouble-shooti…

Answer: Is ther an annotation package for sheep (Ovis aries) by Guido Hooiveld ★ 3.5k

Yes, there is! An `EnsDb` for sheep can be obtained through the so-called `AnnotationHub`. See James' and my posts in the thread linked t…

Votes

FDR and padj in deseq and edger

Comment: Mutect version, matched normal and manual curation in PureCN

Answer: Is ther an annotation package for sheep (Ovis aries)

Is ther an annotation package for sheep (Ovis aries)

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Scholar to James W. MacDonald 62k

Commentator to Michael Love 39k