Bioconductor Rnaseq

Showing : rnaseq • reset

votes

replies

7.3k

views

RUVg ruvseq rnaseq

updated 29 days ago by Shaimaa Gamal • 0 • written 8.9 years ago by Pauly Lin ▴ 150

votes

replies

1.8k

views

RNASeq edgeR RNASeq edgeR

updated 17 days ago by Gordon Smyth 50k • written 11.5 years ago by Maria Keays ▴ 30

votes

replies

871

views

SingleCell RNASeq RNASeqData scRNAseq

updated 2 days ago by wichaidi • 0 • written 17 months ago by irvin.ng • 0

vote

replies

752

views

clusterProfiler RNASeq

updated 1 day ago by sredemption • 0 • written 13 months ago by ruiqi.li ▴ 10

votes

replies

688

views

biomart rnaseq

written 5.2 years ago by jarod_v6@libero.it ▴ 40

votes

replies

200

views

DESeq2 GeneFiltering RNAseq

4 weeks ago • updated 29 days ago kcarey • 0

votes

107

views

scRNAseq RNAseq

updated 9 days ago by ATpoint ★ 4.0k • written 11 days ago by Merav • 0

votes

views

limma edgeR RNASeq

updated 18 hours ago by Gordon Smyth 50k • written 1 day ago by Shaimaa Gamal • 0

votes

views

DESeq2 LongRead DEXSeq IsoformSwitchAnalyzeR RNASeq

updated 1 day ago by Michael Love 41k • written 1 day ago by 09191919 • 0

votes

views

technicalReplicates BatchEffect limma RNASeq

updated 3 hours ago by Gordon Smyth 50k • written 11 hours ago by catv • 0

10 results • Page 1 of 1

Recent ...

Replies

Answer: Cannabis and KEGGgraph by deeenes ▴ 30

Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…

Answer: RNAseq:Technical replicates from different batches by Gordon Smyth 50k

I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…

Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by russ.bainer ▴ 10

Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…

Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Chris • 0

Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …

Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

Votes

Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

Awards • All

Popular Question to James W. MacDonald 65k