Bioconductor Rnaseq

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690

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biomart rnaseq

written 5.2 years ago by jarod_v6@libero.it ▴ 40

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883

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SingleCell RNASeq RNASeqData scRNAseq

updated 6 days ago by wichaidi • 0 • written 17 months ago by irvin.ng • 0

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DESeq2 LongRead DEXSeq IsoformSwitchAnalyzeR RNASeq

updated 5 days ago by Michael Love 41k • written 5 days ago by 09191919 • 0

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limma RNASeq voom

updated 19 hours ago by Gordon Smyth 50k • written 20 hours ago by taur.vil • 0

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138

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technicalReplicates BatchEffect limma RNASeq

4 days ago • updated 1 day ago catv • 0

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1.8k

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RNASeq edgeR RNASeq edgeR

updated 21 days ago by Gordon Smyth 50k • written 11.5 years ago by Maria Keays ▴ 30

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104

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limma edgeR RNASeq

updated 4 days ago by Gordon Smyth 50k • written 5 days ago by Shaimaa Gamal • 0

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117

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scRNAseq RNAseq

updated 13 days ago by ATpoint ★ 4.0k • written 15 days ago by Merav • 0

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763

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clusterProfiler RNASeq

updated 4 days ago by sredemption • 0 • written 13 months ago by ruiqi.li ▴ 10

9 results • Page 1 of 1

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Answer: List of Deprecated Packages for Bioc3.19 by shepherl 3.8k

singleCellTK has been fixed and will remain in Bioconductor

Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10

Yes, I'm working only with genes from terpenoids pathway (14 genes), so I can't use enrichGO? Can you recommend a package or something like…

Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10

Your awnser at Cannabis orgDb solve my problems using enrichGO by far. I'm underdegree biotechnology student, and I learning bioinformatic…

Comment: Trying to use enrichGO by Guido Hooiveld ★ 3.9k

It is indeed better. Anyway, did you notice this part in the output from `str(ortologos_filtrados)`: `$Gene.ID : int 115709372 115716460 …

Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10

I'm new here, but its better now?

Votes

Comment: Trying to use enrichGO

Answer: Cannabis OrgDb

DESeq2: How to find out how well the model fits the data?

Comment: DESeq2 - dispersion estimation when there is none

Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa

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