Biostar Rnaseqpower

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edgeR limma RNASeqPower

updated 4 months ago by Gordon Smyth 45k • written 15 months ago by Ahdee ▴ 50

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RNASeqPower citation

6 days ago stephenjjohnson • 0

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Comment: Using Age or other numerical variable to model expression in deseq2 by James W. MacDonald 60k

If you converted to a factor, the intercept is the reference level (you have to look at `levels(age)` to know what the reference is). If yo…

Answer: How fix lines of dendrogram that overlap in the column portion of a heatmap? by James W. MacDonald 60k

You won't be able to 'fix' that without changing the width to something huge, at which time the usefulness will have been reduced quite a b…

Comment: merge vcf files with different samples and variants? by didanax972 • 0

Use the Professional Solution VCF Merger tool to merge VCF files or more, with 100% data accuracy. It is the most prominent and intuitive u…

Comment: How can i fix this problem in R by ATpoint ★ 1.3k

That means you have a typo. Please copy and paste the command as-is.

Answer: FeaturePlot in scater by alan.ocallaghan ▴ 80

Something like this? ``` r library("scater") example_sce <- mockSCE() example_sce <- logNormCounts(example_sce) example_sce <- r…

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Answer: FeaturePlot in scater

A: ChIPQC bam and bed files question

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