Bioconductor Rnaseqrdata

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786

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microRNA gene RNASeqRData edgeR geneontology

17 months ago faiza • 0

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648

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find RNASeqRData

updated 17 months ago by ATpoint ★ 4.0k • written 17 months ago by yuhang • 0

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1.4k

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RNASeqRData TPM

updated 18 months ago by ATpoint ★ 4.0k • written 18 months ago by prashali.bansal ▴ 10

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454

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RNASeq RNASeqData RNASeqRData

19 months ago marymshahi2021 • 0

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582

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RNAseqRData DeSeq2

updated 2.0 years ago by Michael Love 41k • written 2.0 years ago by Hannah • 0

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3.1k

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RNASeqRData

updated 2.1 years ago by Michael Love 41k • written 2.1 years ago by beslinail • 0

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774

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RNASeqRData edgeR RNASeqR RNASeqData

updated 2.1 years ago by Gordon Smyth 50k • written 2.1 years ago by vikycairoli • 0

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858

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RNASeqRData combat_Seq BatchEffect

2.5 years ago • updated 2.3 years ago zeegzaag • 0

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852

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RNASeqRData limma RNASeq RNASeqR

updated 3.0 years ago by Gordon Smyth 50k • written 3.0 years ago by Rita • 0

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2.6k

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RNASeqRData GO

3.1 years ago Wuschel ▴ 10

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722

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RNAinteract rnaseqGene RNASeqRData rnaseqcomp

3.2 years ago Bogdan ▴ 670

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1.0k

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Deseq2 RNASeqRData unbalancedsamplesize

updated 23 months ago by Michael Love 41k • written 3.2 years ago by Cihat • 0

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2.0k

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RiboProfiling DESeq2 Bioconductor RNASeqRData

updated 17 months ago by Kevin Blighe ★ 3.9k • written 3.2 years ago by Taufiq • 0

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Comment: DEG with low counts by Rajat • 0

Dear Dr. Michael Thanks for you quick reply. I appreciate it. Attached is the plotcounts for one gene. I am experiencing like this in oth…

Comment: Light difference when using coef vs omit a group when compare 3 groups. by Chris • 0

Hi Gordon, thank you so much for your guide! I check my data as you said there is no difference in my data. This is the MDS plot at genes l…

Comment: How to correct for known and surrogate variables in DESeq2? by Michael Love 41k

To question 3: if you model technical variation using only ~group vs ~1, then it will be correlated with known technical variables, which y…

Answer: flowStats Search Error by shepherl 3.8k

We are aware of an issue with bioconductor.org search and are investigating. We apologize for an inconvenience this is causing.

Comment: How to correct for known and surrogate variables in DESeq2? by nhaus ▴ 30

Hey Crystal, did you end up getting advice? I am facing the exact same questions that you are having right now. Would be very grateful if y…

Votes

Answer: Light difference when using coef vs omit a group when compare 3 groups.

C: Add new columns to DESeqResults from text file by matching rownames.

Answer: geneList error in clusterprofiler

Comment: Memory errors using read.bismark?

Comment: Not fully paired differential gene expression analysis

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