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roc
•
reset
0
votes
10
replies
2.4k
views
assignChromosomeRegion in 2.6.0 ChIPpeakAnno
Microarray
Annotation
GO
Network
Regression
Survival
Infrastructure
Escherichia coli
ROC
11.1 years ago
Julie Zhu
★ 4.3k
0
votes
5
replies
1.6k
views
getBioC v1.2.22 & [R] v1.6.2
annotate
edd
genefilter
geneplotter
rhdf5
multtest
ROC
tkWidgets
reposTools
affy
vsn
updated 21.1 years ago by
Jeff Gentry
★ 3.9k • written 21.1 years ago by
White, Charles E WRAIR-Wash DC
▴ 70
0
votes
7
replies
1.7k
views
Seeking assistance on ROC
Genetics
ROC
Genetics
ROC
14.3 years ago
Susan Bosco
▴ 80
0
votes
2
replies
1.7k
views
BioConductor Affy package
ROC
reposTools
affy
ROC
reposTools
affy
21.3 years ago
Susan J. Miller
▴ 20
0
votes
2
replies
1.2k
views
Problems encountered using affy in R
Biobase
annotate
genefilter
multtest
ROC
tkWidgets
affy
vsn
Biobase
annotate
genefilter
updated 21.2 years ago by
Vincent J. Carey, Jr.
6.7k • written 21.2 years ago by
mary.e.logue@ucd.ie
▴ 20
0
votes
3
replies
1.5k
views
RNA degradation (Chris Paulse)
Microarray
Normalization
Cancer
probe
ROC
limma
PROcess
Microarray
Normalization
Cancer
updated 20.7 years ago by
James W. MacDonald
65k • written 20.7 years ago by
Vawter, Marquis
▴ 70
0
votes
2
replies
1.3k
views
gregmisc package-problems with BioC latest release?
Biobase
annotate
edd
genefilter
geneplotter
ROC
limma
siggenes
affyPLM
marray
Biobase
updated 19.5 years ago by
Seth Falcon
★ 7.4k • written 19.5 years ago by
Fátima Núñez
▴ 130
0
votes
2
replies
1.1k
views
Web site suggestions
Biobase
edd
ROC
Biobase
edd
ROC
21.9 years ago
Warnes, Gregory R
▴ 460
0
votes
1
reply
2.9k
views
How can I create a mean ROC curve for multiple plotted ROC curves, R
R
ROC
mean
plot
multiple roc curves
updated 5.6 years ago by
chris86
▴ 420 • written 5.6 years ago by
sap940
• 0
0
votes
1
reply
1.0k
views
Errors w/ getBioC(develOK =TRUE) with R2.0 devel
aCGH
GO
Biobase
DynDoc
annotate
edd
genefilter
geneplotter
rhdf5
multtest
ctc
ROC
affy
19.6 years ago
Matthew Hannah
▴ 940
0
votes
1
reply
916
views
ROC package under R-2.0.0
ROC
ROC
updated 19.5 years ago by
rgentleman
★ 5.5k • written 19.5 years ago by
Xiao-Jun Ma
▴ 20
0
votes
1
reply
1.0k
views
roc50
ROC
ROC
updated 15.3 years ago by
Richard Pearson
▴ 160 • written 15.3 years ago by
peter robinson
▴ 300
0
votes
1
reply
862
views
Help on ROC Analysis.
Microarray
ROC
MEDME
Microarray
ROC
MEDME
updated 14.4 years ago by
Sean Davis
21k • written 14.4 years ago by
Prashantha Hebbar
▴ 260
0
votes
2
replies
1.1k
views
Help on ROC Analysis
Genetics
ROC
MEDME
Genetics
ROC
MEDME
updated 14.4 years ago by
Sean Davis
21k • written 14.4 years ago by
Susan Bosco
▴ 80
0
votes
1
reply
1.5k
views
Seeking assistance on ROC
Microarray
GO
Classification
ROC
graph
ASSIGN
Microarray
GO
Classification
ROC
graph
updated 14.2 years ago by
Steve Lianoglou
★ 13k • written 14.2 years ago by
Sean Davis
21k
0
votes
1
reply
1.3k
views
gcrma vs rma
Microarray
qPCR
probe
ROC
limma
gcrma
Microarray
qPCR
probe
ROC
limma
gcrma
updated 13.7 years ago by
Zhijin Wu
▴ 260 • written 13.7 years ago by
Lucia Peixoto
▴ 330
0
votes
2
replies
1.1k
views
ROC query
ROC
ROC
13.5 years ago
rasanpreet kaur suri
▴ 40
0
votes
1
reply
1.1k
views
ROC query
ROC
ROC
updated 13.5 years ago by
Sean Davis
21k • written 13.5 years ago by
rasanpreet kaur suri
▴ 40
0
votes
0
replies
1.0k
views
Errors w/ getBioC()
aCGH
GO
Biobase
DynDoc
annotate
edd
genefilter
geneplotter
rhdf5
multtest
ctc
ROC
affy
19.7 years ago
Matthew Hannah
▴ 940
0
votes
0
replies
1.1k
views
Bioconductor Digest, Vol 83, Issue 23
Bayesian
ROC
graph
limma
Bayesian
ROC
graph
limma
14.3 years ago
M. Carmen Ruiz de Villa
▴ 10
0
votes
0
replies
1.0k
views
problems with getBioC() and getBioC(develOK=TRUE) on R 2.0.0
aCGH
GO
Biobase
DynDoc
annotate
edd
genefilter
geneplotter
rhdf5
multtest
ctc
ROC
affy
19.5 years ago
rgentleman
★ 5.5k
0
votes
0
replies
1.1k
views
problems with getBioC() and getBioC(develOK=TRUE) on R 2.0.0
aCGH
GO
Biobase
DynDoc
annotate
edd
genefilter
geneplotter
rhdf5
multtest
ctc
ROC
affy
19.5 years ago
Goeman, J.J. MSTAT
▴ 150
0
votes
0
replies
1.0k
views
LDA and qPCR data
ROC
ROC
13.1 years ago
David
▴ 860
0
votes
0
replies
1.1k
views
Analysis of Affy-data from amplified RNA
probe
ROC
probe
ROC
16.3 years ago
Rafael A. Irizarry
★ 2.3k
0
votes
0
replies
1.4k
views
Overlapping ROC plots
Classification
ROC
graph
Classification
ROC
graph
11.8 years ago
Yadav Sapkota
▴ 130
0
votes
0
replies
917
views
TP and FP
ROC
ROC
14.8 years ago
Venkat Sundar
▴ 30
0
votes
0
replies
1.2k
views
Bioconductor 1.0
Microarray
Annotation
Normalization
Cancer
genefilter
geneplotter
multtest
ROC
Microarray
22.0 years ago
Anthony Rossini
▴ 530
0
votes
0
replies
1.5k
views
peer review process/DATE CORRECTION
Biobase
annotate
edd
genefilter
geneplotter
rhdf5
multtest
ROC
tkWidgets
affy
AnnBuilder
22.1 years ago
Vincent J. Carey, Jr.
6.7k
28 results • Page
1 of 1
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Replies
Comment: Reproducibility issue with scran together with lapply and BiocParallel
by
ATpoint
★ 4.0k
Thanks Aaron for the response. RNGseed (for me) has no effect. I actually stumbled over this in one of my analysis where I have a constant …
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! 1)"Your contrast is comparing LGR5 to Homeostasis." means (Lgr5)/(Homeostasis). Is it right? Then, I think if…
Answer: Reproducibility issue with scran together with lapply and BiocParallel
by
Aaron Lun
★ 28k
IIRC **BiocParallel** switches to a different RNG when inside its own functions like `bplapply` - specifically L'Ecuyer-CMRG, as opposed to…
Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★ 1.3k
This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…
Comment: DESeq2 output used for PCA plot on R studio
by
Aaliya
• 0
I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
Votes
C: null model and DEXSeqDataSet object in DEXSEQ
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
Answer: How to retrieve gene ontology GO class from gene list?
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