Bioconductor Ropls

Showing : ropls • reset

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1.4k

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R ropls

updated 5.9 years ago by etienne.thevenot ▴ 40 • written 5.9 years ago by yuan.guo001 • 0

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995

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ropls

updated 5.8 years ago by etienne.thevenot ▴ 40 • written 5.8 years ago by scottericr • 0

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1.7k

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ROPLS LPS-DA

6.1 years ago abigailrandall85 • 0

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700

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Metabolomics ropls

updated 17 months ago by etienne.thevenot ▴ 40 • written 17 months ago by ansari.maya022 • 0

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1.6k

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metabolomicsWorkbenchR PLS OPLS Metabolomics ropls

updated 2.7 years ago by etienne.thevenot ▴ 40 • written 2.7 years ago by Fernando • 0

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559

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Metabolomics ropls

updated 16 months ago by etienne.thevenot ▴ 40 • written 16 months ago by ansari.maya022 • 0

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886

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crlmm ropls Metabolomics

updated 9 months ago by James W. MacDonald 65k • written 9 months ago by Charlotte • 0

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3.1k

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plsda ropls

updated 6.6 years ago by etienne.thevenot ▴ 40 • written 6.6 years ago by michael.eisenring ▴ 10

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841

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ropls

updated 3.8 years ago by Kevin Blighe ★ 3.9k • written 3.8 years ago by tor.demmers • 0

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2.6k

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s-plot ropls opls-da rna-seq

updated 2.7 years ago by Nathalie ▴ 10 • written 3.8 years ago by andreia ▴ 10

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4.8k

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ropls

updated 7.8 years ago by etienne.thevenot ▴ 40 • written 7.8 years ago by dominik.guggisberg • 0

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1.0k

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ropls

21 months ago g0079 • 0

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619

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ropls

3.7 years ago guido.guberman • 0

13 results • Page 1 of 1

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Comment: DESeq filtering specific to contrasts by Michael Love 41k

It will likely not filter it out, but really the per-dataset details would affect the results.

Comment: DESeq filtering specific to contrasts by Carlin95 • 0

Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…

Comment: FilterByExpr low counts with small sample size by Jonathan ▴ 10

Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…

Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Seyram M. • 0

Thank you very much for your reply! I will do so. Kind regards, Seyram

Comment: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0` by isaac.vock • 0

Thank you for your response. I can confirm that setting `-t exon` and/or removing `-s 1` and adding `-O` has no impact on the number of suc…

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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

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