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rtandem
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813
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rTandem compilation failed
rtandem
bug
compilation error
5.0 years ago
Ed Siefker
▴ 230
2
votes
3
replies
994
views
rTANDEM package -- An R encapsulation of the X!Tandem algorithm
Proteomics
rTANDEM
Proteomics
rTANDEM
updated 10.5 years ago by
Steve Lianoglou
13k • written 10.5 years ago by
Frederic Fournier
▴ 40
0
votes
0
replies
788
views
Fwd: rTANDEM package -- An R encapsulation of the X!Tandem algorithm
Proteomics
trigger
rTANDEM
Proteomics
trigger
rTANDEM
10.5 years ago
Frederic Fournier
▴ 40
0
votes
0
replies
124
views
Alternatives to perform peptide identification in Bioconductor version '3.16'?
peptide
peptideidentification
rTANDEM
MSGFplus
Alternatives
updated 4 months ago by
shepherl
3.5k • written 4 months ago by
vaddanki
• 0
4 results • Page
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Comment: Adjusting for baseline when having longitudinal data, mixed model and no treat
by
Gordon Smyth
47k
Perhaps you are thinking of data analyses where the dependent variable is something other than expression itself. In the context of gene e…
Comment: Interpret plot from DiffBind
by
Chris
• 0
If I want to find genes that are more open in diseased than control, I can filter out peaks that have highest log2Fold change like this, is…
Comment: Interpret plot from DiffBind
by
Chris
• 0
Hi Rory. There are so many red dot above and below the blue line so it is hard to know which condition are more open, is that correct? Is 1…
Comment: Extract Limma Adjusted Values for Plotting
by
phelankj
• 0
Thanks, on the normalized values using the same formula?
Answer: Extract Limma Adjusted Values for Plotting
by
James W. MacDonald
63k
You should use `removeBatchEffect` for that.
Votes
Answer: NA transcript values in my Txdb
Comment: Interpret plot from DiffBind
Answer: Use with_go along with other filters in getBM function
Answer: Use with_go along with other filters in getBM function
Answer: Interpret plot from DiffBind
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