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rtandem
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Alternatives to perform peptide identification in Bioconductor version '3.16'?
peptide
peptideidentification
rTANDEM
MSGFplus
Alternatives
updated 14 months ago by
shepherl
3.8k • written 15 months ago by
vaddanki
▴ 10
1
vote
1
reply
1.0k
views
rTandem compilation failed
rtandem
bug
compilation error
5.9 years ago
Ed Siefker
▴ 230
0
votes
0
replies
948
views
Fwd: rTANDEM package -- An R encapsulation of the X!Tandem algorithm
Proteomics
trigger
rTANDEM
Proteomics
trigger
rTANDEM
11.3 years ago
Frederic Fournier
▴ 40
2
votes
3
replies
1.2k
views
rTANDEM package -- An R encapsulation of the X!Tandem algorithm
Proteomics
rTANDEM
Proteomics
rTANDEM
updated 11.4 years ago by
Steve Lianoglou
★ 13k • written 11.4 years ago by
Frederic Fournier
▴ 40
4 results • Page
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Answer: List of Deprecated Packages for Bioc3.19
by
shepherl
3.8k
singleCellTK has been fixed and will remain in Bioconductor
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
Yes, I'm working only with genes from terpenoids pathway (14 genes), so I can't use enrichGO? Can you recommend a package or something like…
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
Your awnser at Cannabis orgDb solve my problems using enrichGO by far. I'm underdegree biotechnology student, and I learning bioinformatic…
Comment: Trying to use enrichGO
by
Guido Hooiveld
★ 3.9k
It is indeed better. Anyway, did you notice this part in the output from `str(ortologos_filtrados)`: `$Gene.ID : int 115709372 115716460 …
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
I'm new here, but its better now?
Votes
Comment: Trying to use enrichGO
Answer: Cannabis OrgDb
DESeq2: How to find out how well the model fits the data?
Comment: DESeq2 - dispersion estimation when there is none
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
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