Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
ruvr
•
reset
0
votes
0
replies
726
views
Incorporating factors of unwanted variation from RUVr into EdgeR cell means model for DE
edger
RUVseq
RUVr
GLM
RNAseq
4.5 years ago
garbuzov
• 0
1
vote
3
replies
2.0k
views
Does it make sense to consider RUVr normalization for single cell RNA analysis?
RUV
ruvseq
ruvr
ruvnormalize
single cell
6.3 years ago
Nik Tuzov
▴ 80
1
vote
4
replies
3.5k
views
Number of co-variables k in RUVSeq (RUVr)
rnaseq
ruvseq
RUVr
edgeR
8.0 years ago
David R
▴ 70
3 results • Page
1 of 1
Recent ...
Replies
Comment: DESeq2 test for synergistic vs additive effects
by
Jay
• 0
Why is TrtAB - TrtA - TrtB + Control "not really a thing"? i came to this forum answer when attempting to use EdgeR to answer a similar que…
Comment: NCBI protein conversion to CDNA and NCBI gene (in R)
by
Gordon Smyth
48k
Continuation of https://support.bioconductor.org/p/9155428/
Comment: Why is DMRcate not available for Bioconductor version 3.18?
by
Tim Peters
▴ 150
Thanks Daniel, Gordon and Lori for flagging this. DSS is only needed for the vignette so I'll remove that section, plus the dependency, som…
Comment: NCBI protein to NCBI cDNA (Ensembl conversions would be great as well) in R
by
R_Page
• 0
Thank you, this works well. As for CDNA, I figured out what I need to find, and have made a new post regarding it.
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
Hello Michael, I am continuing here and need your expert answer on this again I have performed small rna loci and DNA methylation mappin…
Votes
Answer: Confused about the CPM and TMM normalization in edgeR
Answer: Differential gene expression analysis
Comment: Why is DMRcate not available for Bioconductor version 3.18?
Comment: Why is DMRcate not available for Bioconductor version 3.18?
Comment: Why is DMRcate not available for Bioconductor version 3.18?
Awards
• All
Popular Question
to
Poonam
• 0
Scholar
to
James W. MacDonald
64k
Scholar
to
Assa Yeroslaviz
★ 1.5k
Popular Question
to
Gordon Smyth
48k
Popular Question
to
Endre Sebestyén
▴ 70
Locations
• All
WEHI, Melbourne, Australia,
8 minutes ago
United States,
12 minutes ago
United Kingdom,
19 minutes ago
EMBL Heidelberg,
37 minutes ago
United States,
45 minutes ago
Traffic: 497 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6