Showing : sam • reset
0
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FeatureCounts output to SAM like htseq-counts?
featurecounts SAM htseqcounts
updated 20 months ago by ▴ 450 • written 7.8 years ago by • 0
2
votes
2
replies
624
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How to get the final value of the after an automatic method in SAM
microarray SAM
updated 5.8 years ago by 68k • written 5.8 years ago by ▴ 10
0
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0
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1.4k
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Question about converting SAM alignment file data to a visual text alignment (e.g., resembling blastn alignment)
SAM samtools pairwisealignment alignment blastn
6.6 years ago ktehmsen • 0
2
votes
2
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1.7k
views
SAM/siggenes: Differential gene expression analysis
SAM siggenes microarray gene expression sam
8.2 years ago Brian Smith ▴ 120
1
vote
1
reply
1.6k
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How to get diff expresion results from sam files
differential gene expression sam
updated 8.9 years ago by ★ 28k • written 8.9 years ago by • 0
0
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0
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1.7k
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DEXSeq analysis of alternative splicing: error 'SAM optional field tag NH not found'
DEXSeq splicing python SAM
9.4 years ago Fiona ▴ 70
5
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8
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6.8k
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Getting Aligned DNAStringSet from reference and BAM/SAM file(s)
bam sam alignment biostrings
10.1 years ago ben.ward ▴ 30
2
votes
4
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1.6k
views
Interprentation of appropriate statistical test
samr SAM siggenes bioconductor differential gene expression
10.1 years ago svlachavas ▴ 840
0
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3
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1.6k
views
Implementation of SAM statistical technique in R
r SAM bioconductor
updated 10.2 years ago by ★ 3.8k • written 10.2 years ago by ▴ 840
4
votes
4
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2.8k
views
Two-class unpaired test using LIMMA
Limma SAM differential expression
updated 10.3 years ago by 68k • written 10.3 years ago by ▴ 310
10 results • Page 1 of 1
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Comment: Problem at champ.load by Josh • 0
See my anser--I was able to fix this error by installing a specific ChAMP version
Answer: Problem at champ.load by Josh • 0
It looks like the current Bioconducter version of ChAMP (2.36) does not support EPICv2. You have to install a github version of a previous …
Comment: DESeq2 model - How to test case/control time course model when taking account wi by wuwenhui2 • 0
@mikelove Dear Dr. Love, for this design, you recommend using the model "~condition + time + condition:subject.nested + condition:time" com…
Answer: myvariant error by Christelle • 0
An example of my data : [1] "chr1:g.877831T>C" [2] "chr1:g.878314G>C" …
Comment: Guidance Needed: Best Practices for Handling Technical Replicates in RNA-seq Ana by ATpoint ★ 4.7k
Why was my comment removed? It's irritating that it was moderated away without leaving any note.
Votes
Comment: Identifying potentially associated gene set to drug response using GSVA
Answer: Limma - Complex 2-way multi-level contrast with paired samples
Comment: Can't post a question?
Answer: Limma - Complex 2-way multi-level contrast with paired samples
Answer: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
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Popular Question to Hervé Pagès 16k
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