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sample
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locateVariants with sample names
annotation
variantannotation
sample
8.9 years ago
by0
• 0
0
votes
0
replies
852
views
select samples for qPCR
qpcr
sample
8.6 years ago
Frederico Moraes Ferreira
▴ 100
0
votes
3
replies
1.0k
views
Sampling protein coding genes of the same length distribution as another set of elements using GRanges
granges
R
sample
updated 8.4 years ago by
Julian Gehring
★ 1.3k • written 8.4 years ago by
Dimitris Polychronopoulos
▴ 80
0
votes
3
replies
1.1k
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I want to sample (random ) nucleic acids at middle 20 positions of DNAstring set
DNAStringSet
sample
updated 8.4 years ago by
Hervé Pagès
16k • written 8.4 years ago by
vinod.acear
▴ 50
0
votes
1
reply
1.6k
views
Sampling from a flowSet to a flowFrame
bioconductor
flowcore
sample
updated 7.8 years ago by
Jiang, Mike
★ 1.3k • written 7.8 years ago by
cherryzt
• 0
0
votes
4
replies
1.1k
views
Data structure for my dataset
metadata
grangeslist
granges
sample
updated 7.0 years ago by
Michael Lawrence
★ 11k • written 7.0 years ago by
Sim1pall8a
• 0
6 results • Page
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Comment: DESeq filtering specific to contrasts
by
Michael Love
41k
It will likely not filter it out, but really the per-dataset details would affect the results.
Comment: DESeq filtering specific to contrasts
by
Carlin95
• 0
Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…
Comment: FilterByExpr low counts with small sample size
by
Jonathan
▴ 10
Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Seyram M.
• 0
Thank you very much for your reply! I will do so. Kind regards, Seyram
Comment: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
by
isaac.vock
• 0
Thank you for your response. I can confirm that setting `-t exon` and/or removing `-s 1` and adding `-O` has no impact on the number of suc…
Votes
Install/Switch between multiple versions of R, Rstudio, and Bioconductor
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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