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samr
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Interprentation of appropriate statistical test
samr
SAM
siggenes
bioconductor
differential gene expression
9.2 years ago
svlachavas
▴ 830
0
votes
2
replies
1.7k
views
SAM r for finding up and down regulated genes
samr
updated 8.2 years ago by
Valerie Obenchain
★ 6.8k • written 8.2 years ago by
Linda Chaba
▴ 10
1
vote
1
reply
2.8k
views
How to use SamR
samr
rnaseq
CRAN
updated 9.5 years ago by
Martin Morgan
25k • written 9.5 years ago by
aristotele_m
▴ 40
0
votes
1
reply
848
views
How to modify function of samr.estimate.depth of samr
samr
updated 8.8 years ago by
James W. MacDonald
65k • written 8.8 years ago by
yuan.qing
▴ 10
1
vote
1
reply
1.1k
views
samr: understanding scoring line not parallel to diagonal; reproduce example C
samr
8.7 years ago
SamGG
▴ 350
0
votes
1
reply
2.5k
views
Installation of samr package on R v3.4 mac OS Sierra
samr
updated 6.9 years ago by
daniel.vantwisk
▴ 50 • written 6.9 years ago by
tommykeves
• 0
6 results • Page
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Answer: Cannabis and KEGGgraph
by
deeenes
▴ 30
Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…
Answer: RNAseq:Technical replicates from different batches
by
Gordon Smyth
50k
I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…
Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param
by
russ.bainer
▴ 10
Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
by
Chris
• 0
Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …
Comment: How to retrieve detailed regression results from deseq2
by
Weiqian
▴ 10
Hi Michael, thanks for the answer! I'll have a look : )
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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