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Comment: broken chain import in liftOver
by
Marcel Ramos
570
You could also try using one of the chain files in `AnnotationHub`, which gets auto-cached:
```r
library(AnnotationHub)
query(ah <- Annot…
Answer: paired analysis : return data matrix with indvidual/subject effects eliminated.
by
James W. MacDonald
59k
See `removeBatchEffect` in the `limma` package.
Comment: GDCdownload Directory Problem :(
by
Marcel Ramos
570
FWIW, `TCGAutils` is not a related package.
Comment: help please！
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1051444231
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0
> BiocManager::install("AnnotationDbi",force = TRUE)
'getOption("repos")' replaces Bioconductor
standard repositories, see '?repositories' …
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