Biostar Scp

Showing : scp • reset

0

votes

3

replies

1.0k

views

deseq2 scp Unix Single-Cell

updated 2.5 years ago by Martin Morgan 25k • written 2.5 years ago by vincent.croset ▴ 20

1 result • Page 1 of 1

Recent ...

Replies

Answer: I got error message about DESeqDataSetFromMatrix by swbarnes2 ★ 1.1k

Did you do `library(DESeq2)` first? That's the error you get when the software has no idea what function you are referring to, beca…

Comment: miRNA differential expression analysis - treat as transcript level? by Michael Love 37k

This is very low and I think you can just use regular count-based methods safely. If you look at the ~3 features above 1 those are probably…

Comment: LogFC: how do you determine the cutoff for differentially expressed genes? by OE • 0

Hi Aaron, I have been performing some Diffrential Methylation Analysis and found some logFC values really closer to 0 ( from - 0.07 to 0.1…

Comment: Macbook M1 install genefilter failed by matt.broerman • 0

This error is similar to this one: https://stackoverflow.com/questions/66817276/how-to-install-rcpparmadillo-on-apple-silicon-m1-macs So i…

Comment: miRNA differential expression analysis - treat as transcript level? by BG • 0

Hi, attached is the plot for the inferential variance (code according to the fishpond vignette). How does this look to you? The first plot …

Votes

Awards • All

Teacher to Michael Love 37k