Bioconductor Scrna

Showing : scrna • reset

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4.6k

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scRNA monocle packages Tutorial

4.6 years ago 444579004 • 0

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4.2k

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MAST scRNA GSEA

updated 6.7 years ago by Andrew_McDavid ▴ 270 • written 6.7 years ago by siajunren • 0

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2.2k

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DropletUtils emptyDrops scRNA scRNAseq 10x

20 months ago Peter Hickey ▴ 690

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2.2k

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DESeq2 Scrna scRNAseq

2.7 years ago RDoc ▴ 10

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1.7k

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scRNA zinbwave batch IntegratedData

updated 3.6 years ago by davide risso ▴ 950 • written 3.6 years ago by Assa Yeroslaviz ★ 1.5k

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1.7k

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Seurat scRNA debugging exceptions unit-test

updated 4.4 years ago by Martin Morgan 25k • written 4.4 years ago by moldach ▴ 20

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1.5k

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scrna scrnaseq differential gene expression

updated 6.5 years ago by davide risso ▴ 950 • written 6.5 years ago by d.depledge • 0

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1.5k

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scater scrna

updated 7.2 years ago by Aaron Lun ★ 28k • written 7.2 years ago by hrishi27n ▴ 20

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1000

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scRNAseq scrna paireddesign edgeR pseudobulking

updated 8 months ago by Gordon Smyth 50k • written 8 months ago by garcia • 0

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980

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scRNAseq scRNA batchelor BatchEffect

updated 3.4 years ago by Aaron Lun ★ 28k • written 3.4 years ago by Adrien • 0

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884

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SCRNA

updated 6.5 years ago by Aaron Lun ★ 28k • written 6.5 years ago by sumetha • 0

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717

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scRNAseq quickcluster scRNA scran

4 months ago ruba-mahmoud • 0

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654

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scrna scRNAseq

updated 5 months ago by Gabriella • 0 • written 13 months ago by sarah.jobbins • 0

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625

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scran Normalization scRNA BatchEffect

15 months ago r_grau ▴ 10

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392

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scRNA scRNAseq

updated 8 months ago by ATpoint ★ 4.0k • written 8 months ago by Omer • 0

15 results • Page 1 of 1

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Answer: The issue with SGSeq_analyzeFeatures() returns errors on BAM files by kamryncole1963 • 0

https://support.bioconductor.org/p/85837/[tunnel rush][1] Refer to this link, it may help. [1]: https://tunnelrush3.com

Comment: flowStats Search Error by SamGG ▴ 350

So do I. The direct URL is https://bioconductor.org/packages/3.18/bioc/html/flowStats.html

Comment: Interaction Terms in DESeq2 - Shrinkage by andrebolerbarros ▴ 20

Thanks for your suggestion! For `apeglm` shrinkage, on that scenario, I would have to relevel the variable and then re-run with `nbinomWal…

Answer: Interaction Terms in DESeq2 - Shrinkage by swbarnes2 ★ 1.3k

I think the simpler way to do it is to make a new column of conc_time_tissue all stuck together, and make that column your design. Then …

Comment: SingleR Label.Ont by lisia • 0

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Answer: ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with var