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seqlogo
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4
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Error of PWM not colsum to 1 from package DiffLogo or seqLogo
seqLogo
DiffLogo
19 months ago
zhxiaokang
▴ 20
0
votes
0
replies
1.2k
views
seqLogo package: sequence logo graph with background frequency?
seqLogo
seqLogo
12.4 years ago
Tim Smith
★ 1.1k
0
votes
0
replies
786
views
cosmo for particular sequences
seqLogo
seqLogo
11.6 years ago
Guest User
★ 13k
0
votes
3
replies
2.4k
views
Drawing multiple sequence logos with seqLogo?
graph
seqLogo
graph
seqLogo
13.6 years ago
Nenad Bartonicek
▴ 60
0
votes
5
replies
1.5k
views
Plotting protein position weighted matrices in seqLogo and DiffLogo
seqlogo
DiffLogo
updated 7.7 years ago by
mgledi
• 0 • written 7.8 years ago by
jeffb
• 0
0
votes
1
reply
1.2k
views
PWM with columns that add up to 1
biostrings
seqlogo
pwm
updated 7.4 years ago by
Marcel Ramos
690 • written 7.4 years ago by
clausdkuhn
• 0
0
votes
0
replies
773
views
Change chars ACGT to ACGU in seqLogo
seqLogo
seqLogo
10.4 years ago
Fabrice Tourre
▴ 970
7 results • Page
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Answer: Cannabis and KEGGgraph
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deeenes
▴ 30
Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…
Answer: RNAseq:Technical replicates from different batches
by
Gordon Smyth
50k
I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…
Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param
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russ.bainer
▴ 10
Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
by
Chris
• 0
Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …
Comment: How to retrieve detailed regression results from deseq2
by
Weiqian
▴ 10
Hi Michael, thanks for the answer! I'll have a look : )
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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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