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0
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Scoring DNA motifs by conservation
conservation
sequence
genomicalignments
5.7 years ago
martin.busch
• 0
4
votes
3
replies
1.6k
views
Extracting sequences from BSgenomeViews object
sequence
bsgenome
updated 6.7 years ago by
Martin Morgan
25k • written 6.7 years ago by
nicola.romano
▴ 10
0
votes
2
replies
2.1k
views
Biostrings: retrieve 3'UTR sequence with Transcript
R
Biostrings
sequence
updated 7.1 years ago by
Mike Smith
★ 6.5k • written 7.1 years ago by
aspenaure
• 0
2
votes
4
replies
1.3k
views
plotting proteases digestion points in a protein
biostrings
iranges
sequence
alignment
protein
updated 7.2 years ago by
Michael Lawrence
★ 11k • written 7.2 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
1.9k
views
Map siRNA-Sequence to Gene
sequence
annotationhub
biostrings
updated 8.7 years ago by
Hervé Pagès
16k • written 8.7 years ago by
antje.janosch
• 0
0
votes
1
reply
1.3k
views
ABI HRM data analysis
ABI
sequence
DNA
melting
curve
updated 8.9 years ago by
Hervé Pagès
16k • written 8.9 years ago by
Prasanth
▴ 20
3
votes
3
replies
1.6k
views
Reading large DNA alignments and keeping polymorphic sites
sequence
alignment
biostrings
updated 9.4 years ago by
Hervé Pagès
16k • written 9.4 years ago by
ben.ward
▴ 30
0
votes
2
replies
1.7k
views
How do I extract data from a .ab1 file ?
ab1
sequence
sangerseqR
updated 9.4 years ago by
aaron.l.statham
▴ 10 • written 9.4 years ago by
anuragm
• 0
8 results • Page
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Comment: minfi::read.metharray.exp
by
clacarion
• 0
I think its work with `read.metharray.sheet` ```r > sheet <- read.metharray.sheet("/Users/clarachretienneau/Desktop/clock_epigenetic/PJ120…
Comment: minfi::read.metharray.exp
by
clacarion
• 0
Thank you for your response Basti ! I add all the idat files in a unique folder called "idat" and add it in my path ```r > list.files("…
Answer: List of Deprecated Packages for Bioc3.19
by
shepherl
3.8k
singleCellTK has been fixed and will remain in Bioconductor
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
Yes, I'm working only with genes from terpenoids pathway (14 genes), so I can't use enrichGO? Can you recommend a package or something like…
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
Your awnser at Cannabis orgDb solve my problems using enrichGO by far. I'm underdegree biotechnology student, and I learning bioinformatic…
Votes
Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.
Answer: minfi::read.metharray.exp
Comment: Trying to use enrichGO
Answer: Cannabis OrgDb
DESeq2: How to find out how well the model fits the data?
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