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shiny
•
reset
1
vote
7
replies
2.7k
views
Shiny app for RefNet, PSICQUIC: annotated protein/protein interactions
shiny
network
interactions
9.4 years ago
pshannon
▴ 100
0
votes
7
replies
1.4k
views
Problems with DESeq2 'design' parameter using Shiny/rhandsontable
deseq2
shiny
design
rhandsontable
hot_to_r()
updated 5.1 years ago by
Michael Love
41k • written 5.1 years ago by
hinkel2
• 0
12
votes
3
replies
6.0k
views
Error while uploading Bioconductor packages - R Shiny
shiny
package
deploy
6.0 years ago
lloyd.izard
▴ 80
3
votes
3
replies
1.3k
views
Sharing SC3_interactive results
SC3
single-cell
shiny
updated 6.9 years ago by
Vladimir Kiselev
▴ 150 • written 6.9 years ago by
cfustero
▴ 20
0
votes
3
replies
1.4k
views
browseGenome with Shiny
rtracklayer
browsegenome
shiny
updated 5.5 years ago by
Michael Lawrence
★ 11k • written 5.5 years ago by
vivek82
• 0
0
votes
1
reply
1.6k
views
News:
Plotly uprading issue in ChAMP package
ChAMP
Epigenetics
plotly
Shiny
GUI
News
7.4 years ago • updated 7.2 years ago
Yuan Tian
▴ 90
0
votes
1
reply
1.2k
views
R packages developed using shiny
shiny
updated 7.4 years ago by
Martin Morgan
25k • written 7.4 years ago by
bhakti.dwivedi
• 0
0
votes
1
reply
743
views
Error in ChAMP GUI
ChAMP
shiny
ChAMPdata
updated 2.0 years ago by
anna.stanislawska
• 0 • written 2.0 years ago by
Mari
• 0
0
votes
1
reply
1.8k
views
DEBrowser shiny - Maximum upload size exceeded - error
DEBrowser
shiny
5.2 years ago
tomasfly
• 0
0
votes
1
reply
889
views
AnnotationHub display() gives JavaScript Alert and DataTables warning
AnnotationHub
Shiny
Rstudio
updated 4.1 years ago by
shepherl
3.8k • written 4.1 years ago by
bwiley4
• 0
0
votes
1
reply
1.5k
views
shiny account on mac not deploying server
limmagui
shiny
8.0 years ago
christopher.clarskon15
▴ 20
1
vote
1
reply
1.3k
views
reactive CellCODE heatmap
cellcode
shiny
heatmap
updated 7.9 years ago by
Andrzej Oleś
▴ 750 • written 7.9 years ago by
christopher.clarskon15
▴ 20
0
votes
0
replies
521
views
Displaying large image stacks (e.g. from multiplexed immunohistochemistry) using shiny and EBImage
shiny
EBImage
20 months ago
Wolfgang Huber
★ 13k
7
votes
0
replies
3.6k
views
Tutorial:
New edX "Data analysis for Life Sciences" module: High performance computing for reproducible genomics
annotation
genomicranges
visualization
docker
shiny
Tutorial
8.1 years ago
Vincent J. Carey, Jr.
6.7k
6
votes
0
replies
1.3k
views
News:
Winners of the 1st Shiny Contest: iSEE
iSEE
shiny
summarizedExperiment
News
5.0 years ago
Aaron Lun
★ 28k
0
votes
0
replies
719
views
Export Results from BatchQC Shiny App
BatchQC
RNA-seq
R
Shiny
batch-effect
3.9 years ago
manninm
• 0
0
votes
0
replies
1.8k
views
Shiny - error messages with validate
R
validate
shiny
8.5 years ago
alptaciroglu
▴ 50
17 results • Page
1 of 1
Recent ...
Replies
Answer: New genes that did not exist in dds object suddenly showed up after degPatterns
by
Michael Love
41k
May be documented by the software you are using? https://github.com/lpantano/DEGreport
Answer: Doing comparison of RNA-seq data using Deseq2
by
Michael Love
41k
Take a look at our workflow, this starts from a beginner's level. You could export from Excel using CSV or TSV, then read into R. htt…
Answer: WGCNA: analysis of complex trait associations with regressions
by
James W. MacDonald
65k
This support site is meant to help people with questions about Bioconductor packages (WGCNA is not a Bioconductor package). You might try o…
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Votes
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
DESeq2 normalization vs VST vs rlog
Answer: DESeq2 "Contrast" option
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