Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
signeR
•
reset
0
votes
0
replies
509
views
Expanded vcf
signeR
mutationcountmatrix
expandedvcf
3.4 years ago
Nikita
• 0
0
votes
1
reply
710
views
Error Message in signeR
signeR
getseq
updated 4.9 years ago by
renan.valieris
▴ 10 • written 4.9 years ago by
TRASA
• 0
0
votes
2
replies
901
views
VCF files incompatible with signeR
software error
signeR
5.3 years ago
Dan
• 0
1
vote
3
replies
997
views
Installing SigneR problem
signer
install error
updated 5.3 years ago by
shepherl
3.8k • written 5.3 years ago by
taha.valizadeh
• 0
0
votes
4
replies
1.3k
views
about the package signeR
signeR
updated 7.2 years ago by
renan.valieris
▴ 10 • written 7.3 years ago by
Bogdan
▴ 670
1
vote
3
replies
2.9k
views
signeR(): wrong sign in 'by' argument
signeR
updated 7.4 years ago by
renan.valieris
▴ 10 • written 7.4 years ago by
Miguel Juliá
• 0
6 results • Page
1 of 1
Recent ...
Replies
Comment: Which input file is used for DGEList in EgdeR?
by
Michael Love
41k
"gene_counts_length_scaled.tsv file generated by the nf-core be exactly that?" No that is the counts scaled by the length. Counts + offset…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Michael Love
41k
These genes are fine. They are just the ones where, by chance, the sample variance is below the sample mean. It happens. DESeq2 brings thes…
Comment: DEG with low counts
by
Michael Love
41k
These counts are too low, only a few samples above a count of 10. So for typical RNA-seq data that is underpowered to call differences. It…
Comment: DESeq filtering specific to contrasts
by
Michael Love
41k
If the counts are too low it in one group then you can't make the comparison either way (whether they are filtered out or just under-powere…
Comment: Estimating Cell Counts for EPIC V2 array data
by
normawiedman059
• 0
0 [103] spam_2.9-1 doParallel_1.0.17 iterators_1.0.14 [106] foreach_1.5.2 beeswarm_0.4.0 tgp_2.4-20 [109] beanplot_1.3.1 fpc_2.2-9 dbscan_1…
Votes
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
Comment: DEXSeq DEXSeqDataSet count matrix duplication
Awards
• All
Popular Question
to
BioinfGuru
▴ 20
Popular Question
to
Gordon Smyth
50k
Scholar
to
Peter Hickey
▴ 740
Popular Question
to
sropri
• 0
Popular Question
to
W. Evan Johnson
▴ 850
Locations
• All
Wageningen University, Wageningen, the Netherlands,
just now
United States,
1 minute ago
France,
8 minutes ago
WEHI, Melbourne, Australia,
9 minutes ago
Switzerland,
20 minutes ago
Traffic: 860 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6