Bioconductor Simulation

Showing : simulation • reset

votes

replies

1.0k

views

polyester simulation RNA-seq syntheticdata

updated 2.8 years ago by Gordon Smyth 48k • written 2.8 years ago by Endre Sebestyén ▴ 70

vote

777

views

splatter simulation

5.4 years ago luke.zappia ▴ 50

votes

replies

838

views

rna-seq polyester simulation time course

5.8 years ago fa.gholizadeh89 • 0

votes

replies

1.1k

views

simulation count matrix RNA-seq Polyester

updated 5.8 years ago by Alyssa Frazee ▴ 210 • written 5.8 years ago by fa.gholizadeh89 • 0

votes

replies

997

views

polyester rnaseq simulation

6.1 years ago sseo2 • 0

votes

replies

958

views

job computational biology simulation evolution Gene network Job

6.1 years ago isaac.salazar • 0

votes

replies

956

views

bioconductor R jobs C++ simulation Job

6.7 years ago Ramon Diaz-Uriarte ▴ 70

7 results • Page 1 of 1

Recent ...

Replies

Answer: ''Model_Matrix'' error by Gordon Smyth 48k

This is actually an error message from base R rather than from limma. The error says that `Group` contains only one value, so your assumpti…

Comment: Speeding up of DelayedArray::write_block() by Hervé Pagès 16k

> I don't know the details but do you mean using HDF5RealizationSink or TENxRealizationSink will make it possible to writing sparse multi-d…

Comment: DMRcate design by Jitendra ▴ 10

Thanks James, do I also need to mention 'contrasts=FALSE' in cpg.annotate.And also what to mentions in analysis.type="differential",/ "ANO…

Comment: Speeding up of DelayedArray::write_block() by Koki ▴ 10

I don't know the details but do you mean using `HDF5RealizationSink` or `TENxRealizationSink` will make it possible to writing sparse multi…

Comment: DelayedArray::read_sparse_block by Koki ▴ 10

Ok, I understood. How about "writing" to HDF5? Are you going to implement `write_block_as_sparse` in `SparseArray` package?

Votes

Steps needed to change design (relevel factors) in DESeq2

Answer: DMRcate design

Comment: DMRcate design

Awards • All