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singlecellRNA-Seq
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Job:
Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
singlecellRNA-Seq
pathview
statistics
R
3.7 years ago • updated 3.6 years ago
Luo Weijun
★ 1.6k
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Job:
Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
R
statistics
pathview
singlecellRNA-Seq
4.0 years ago • updated 3.7 years ago
Luo Weijun
★ 1.6k
2 results • Page
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Comment: RSubread output significantly different from bash Subread output
by
Aimee
• 0
Thank you! I will try rerunning with that parameter and see if it fixes the discrepancy! I'll report back.
Answer: RSubread output significantly different from bash Subread output
by
ATpoint
★ 4.6k
The R version counts multimappers (countMultiMappingReads is TRUE by default) while the command line version does not. It's beyond me why t…
Comment: Can't post a question?
by
Aimee
• 0
I copied my text to a file in linux and ran: ```r grep --color='auto' -P -n "[^\x00-\x7F]" filename.txt ``` It highlighted everything that…
Answer: sva: get a sv for RIN scores
by
Gordon Smyth
52k
Surrogate variables are not constructed from known variates, so one doesn't get surrogate variables for RIN scores. I am guessing that the …
Comment: biomaRt rnorvegicus_gene_ensembl not available anymore
by
alexandra.casey
• 0
any update? It's still not working for me. I'm amazed it's taking this long to fix!
Votes
Answer: How to annotate a limma Elist raw class object with an annotation file
Comment: How to annotate a limma Elist raw class object with an annotation file
QSEA- Extraction of Normalized methylation across the samples
Comment: scuttle::perFeatureQCMetrics runs very slow for big scRNA-seq data
A: DESeq2 One-way ANOVA with 3 sample groups?
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