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slingshot
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Error with slingshot slingPseudotime and slingCurveWeights after using fitGAM from tradeSeq
tradeSeq
slingshot
21 months ago • updated 20 months ago
manduchi
▴ 10
2
votes
2
replies
1.7k
views
slingshot: error with plot3d.SlingshotDataSet
slingshot
plot3d.SlingshotDataSet
22 months ago
manduchi
▴ 10
0
votes
2
replies
713
views
Slingshot - residual_variance
Slingshot
updated 4.0 years ago by
Martin Morgan
25k • written 4.0 years ago by
Adrian Johnson
▴ 330
0
votes
2
replies
323
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Singlecell protein surface (ADT) pseudotime techniques
monocle
slingshot
6 months ago
EspressoKris
▴ 10
4 results • Page
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Comment: How to retrieve detailed regression results from deseq2
by
Weiqian
▴ 10
Hi Michael, thanks for the answer! I'll have a look : )
Comment: DESeq filtering specific to contrasts
by
Michael Love
41k
It will likely not filter it out, but really the per-dataset details would affect the results.
Comment: DESeq filtering specific to contrasts
by
Carlin95
• 0
Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…
Comment: FilterByExpr low counts with small sample size
by
Jonathan
▴ 10
Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Seyram M.
• 0
Thank you very much for your reply! I will do so. Kind regards, Seyram
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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