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Comment: Trouble importing my own Gene Ontology Annotation into topGO
by
Raito92
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60
Thanks for your answer!
Oddly enough, I solved the problem by simply taking the system.file function and package = "topGO" parameter out.…
Comment: Bioconducter can not be installed on latest RStudio
by
Mike Smith
★
5.6k
There's very little information to work with here, but my guess is that you're missing some linux system libraries. The **xml2** package r…
Answer: Using queryMany() in mygene package: Problem of querying Entrez gene IDs based o
by
Guido Hooiveld
★
3.3k
I am not familiar with the package `mygene`, but please note that unigene has been retired 3 years ago! https://ncbiinsights.ncbi.nlm.nih.g…
Answer: GC content
by
Robert Castelo
★
2.9k
hi,
The help page of `getGeneLengthAndGCContent()` says that this function "Automatically retrieves gene length and GC-content informati…
Comment: Finding differentially expressed genes in a prospective cohort study
by
YC
•
0
Thank you for your explanation and clarification. So, if I understand right, the purpose of building linear models in LIMMA is to find diff…
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