Bioconductor Spikein

Showing : spikein • reset

votes

replies

3.7k

views

edgeR SpikeIn RNASeq

updated 6 months ago by Miguel • 0 • written 3.1 years ago by robert.chen • 0

vote

replies

2.9k

views

CUTandRUN edgeR Normalization SpikeIn ChIPSeq

updated 16 months ago by Bogdan ▴ 670 • written 3.5 years ago by Hesh ▴ 10

votes

replies

1.6k

views

DESeq2 SpikeIn Normalization DifferentialExpression

updated 14 months ago by ATpoint ★ 4.0k • written 14 months ago by kalavattam ▴ 10

votes

replies

1.5k

views

DiffBind SpikeIn Normalization ChIP-seq csaw

16 months ago • updated 15 months ago spg • 0

votes

1.2k

views

DESeq2 SpikeIn Normalization

updated 14 months ago by Michael Love 41k • written 14 months ago by kalavattam ▴ 10

votes

replies

1.1k

views

ChIPSeq SpikeIn edgeR Normalization

2.7 years ago maria.soler • 0

votes

replies

886

views

DiffBind ChIPSeq Normalization SpikeIn

2.5 years ago Drew • 0

votes

replies

687

views

SpikeIn SingleCell

2.6 years ago mb1996 • 0

vote

replies

570

views

SpikeIn DiffBind

13 months ago Weisheng • 0

votes

replies

views

DiffBind Errorinsocketconnection SpikeIn

22 hours ago Virangika • 0

10 results • Page 1 of 1

Recent ...

Replies

Answer: List of Deprecated Packages for Bioc3.18 by shepherl 3.8k

previously unannounced, COHCAP is not deprecated but removed with release 3.19. see [mailing list discussion](https://stat.ethz.ch/piperm…

Answer: SNP locus package for mouse? by James W. MacDonald 65k

There isn't (IIRC) an official way to do this, but [Herve has a GitHub][1] with a package that you could use if you are willing to put in t…

Answer: flowStats Search Error by James W. MacDonald 65k

A better approach is to click on the Packages header on the main site, then search on that page for flowStats, rather than searching the en…

Comment: geneList error in clusterprofiler by Ana • 0

Ahh thank you, that fixed it!

Answer: geneList error in clusterprofiler by Basti ▴ 760

Have a look at the documentation : https://www.rdocumentation.org/packages/clusterProfiler/versions/3.0.4/topics/gseGO geneList argument s…

Votes

Answer: geneList error in clusterprofiler

Comment: Memory errors using read.bismark?

Comment: Not fully paired differential gene expression analysis

Comment: [DiffBind] Obtaining normalization factors

Answer: ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with var

Awards • All