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Comment: What should be the normalization protocol for RNA seq data for WGCNA?
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sukeshinik5
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Thank you so much for your response. Can you please tell me what type of preprocessing should be expected for any gene correlation analysis…
Comment: Need help interpreting heatmaps from limma
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odisgriffin205
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0
In your case, you have three groups: ZnD, ZnR, and ZnE. The ZnR group serves as the control, while ZnD and ZnE are being compared against i…
Answer: What should be the normalization protocol for RNA seq data for WGCNA?
by
ATpoint
★
4.5k
WGCNA is still not part of Bioconductor (https://support.bioconductor.org/p/9159948/#9159959) so please check its documentation what the au…
Comment: How to subset voomLmFit (MArrayLM) object?
by
Guido Hooiveld
★
4.1k
Thanks to the both of you for your clarifications and suggestions!
Answer: featureCounts fails to load annotation file
by
Yang Liao
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440
Hi Yasmin, I'm following up on the issue you're having with featureCounts and the GRCh38 RefSeq annotation. I've been testing featureCounts…
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